Table 1.
Mutation | SNP ID | PredictSNP | Confidence score (%) | MAPP | Confidence score (%) | PhD-SNP | Confidence score (%) | PolyPhen-1 | Confidence score (%) | PolyPhen-2 | Confidence score (%) | SIFT | Confidence score (%) | SNAP | Confidence score (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V40M | rs759413482 | Deleterious | 64 | – | – | Neutral | 68 | Deleterious | 74 | Deleterious | 47 | Deleterious | 53 | Deleterious | 72 |
R57L | rs1378953136 | Deleterious | 65 | Deleterious | 48 | Deleterious | 86 | Neutral | 67 | Deleterious | 40 | Deleterious | 46 | Deleterious | 72 |
C61Y | rs753385457 | Deleterious | 87 | Deleterious | 77 | Deleterious | 89 | Deleterious | 74 | Deleterious | 65 | Deleterious | 53 | Deleterious | 87 |
D73N | rs568854299 | Neutral | 65 | Neutral | 66 | Neutral | 58 | Neutral | 67 | Deleterious | 47 | Deleterious | 45 | Neutral | 61 |
G98R | rs1234813494 | Deleterious | 87 | Deleterious | 88 | Deleterious | 77 | Deleterious | 74 | Deleterious | 65 | Deleterious | 79 | Deleterious | 81 |
G108S | rs760745635 | Deleterious | 87 | Deleterious | 57 | Deleterious | 88 | Deleterious | 74 | Deleterious | 81 | Deleterious | 79 | Deleterious | 56 |
D114N | rs936261369 | Deleterious | 87 | Deleterious | 77 | Deleterious | 86 | Deleterious | 59 | Deleterious | 81 | Deleterious | 53 | Deleterious | 72 |
E129Q | rs1316376447 | Deleterious | 61 | Neutral | 64 | Deleterious | 86 | Deleterious | 59 | Deleterious | 55 | Deleterious | 53 | Neutral | 55 |
A131T | rs1295542567 | Deleterious | 72 | Deleterious | 78 | Deleterious | 88 | Neutral | 67 | Deleterious | 81 | Deleterious | 45 | Deleterious | 62 |
A131V | rs373399618 | Deleterious | 87 | Deleterious | 77 | Deleterious | 88 | Deleterious | 59 | Deleterious | 81 | Deleterious | 53 | Deleterious | 72 |
I145T | rs757003466 | Deleterious | 87 | Deleterious | 78 | Deleterious | 73 | Deleterious | 74 | Deleterious | 65 | Deleterious | 79 | Deleterious | 62 |
G155A | rs752040143 | Neutral | 60 | Deleterious | 41 | Neutral | 51 | Neutral | 67 | Deleterious | 45 | Deleterious | 43 | Neutral | 50 |
D157N | rs767025068 | Neutral | 63 | – | – | Neutral | 68 | Neutral | 67 | Deleterious | 45 | Deleterious | 45 | Neutral | 55 |