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. 2020 Sep 17;11:4654. doi: 10.1038/s41467-020-18508-3

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — Boxplots indicate the median and interquartile range (IQR), and whiskers span 1.5 times the IQR. a VST normalized expression profiles of select LTR, LINE, and SINE repeat families. RNA-seq data from Graf et al.³². b Enrichment of several transposable element (TE) families in ATAC-seq peaks, called from 30 million reads. Promoter peaks fell within the 2 kb region upstream of TSS. Intergenic peaks did not overlap the 2 kb regions upstream of TSS, exons, or introns (n = 3 biologically independent samples). Source data are provided as a Source Data file.