TABLE 2.
The genetic NP potential of cultivated isolates from coastal seawater and sandy sediment samples with antimicrobial bioactivity analyzed in the antiSMASH database
| 16S rRNA gene sequence (RDP classifier) | Strain | Source | Medium | No. of contigs | N50 | No. of OBUs from eDNAa
|
No. of antiSMASH annotations |
||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| KS | AD | Siderophore | NRPS | PKS-T1 | NRPS/pKS | ||||||
| Vibrio | S12_S33 | Seawater | MBA | 508 | 75,863 | 0 | 0 | 0 | 0 | 1 | 0 |
| Aliivibrio | S10_S31 | Seawater | MBA | 192 | 179,121 | 0 | 0 | 1 | 0 | 0 | 0 |
| Vibrio | S11_S32 | Seawater | MBA | 215 | 75,904 | 0 | 0 | 0 | 0 | 0 | 0 |
| Vibrio | S9_S30 | Seawater | MBA | 255 | 231,592 | 0 | 0 | 1 | 7 | 1 | 0 |
| Pseudoarthrobacter | S13_S34 | Seawater | SWA | 81 | 197,152 | 0 | 1c | 1 | 3 | 0 | 1 |
| Pseudoalteromonas | S16_S37 | Seawater | SWG | 304 | 70,525 | 4b | 0 | 1 | 3 | 0 | 5 |
| Vibrio | S17_S38 | Seawater | SWG | 66 | 151,578 | 0 | 0 | 1 | 0 | 0 | 0 |
| Arthrobacter | S1_S22 | Sediments | MBG | 52 | 275,038 | 0 | 2d | 1 | 3 | 0 | 0 |
a
Operational biosynthetic units (OBUs) from the eDNA recovered in the genomes.
b
OBU_4427, OBU_8, OBU_4556, and OBU_105.
c
OBU_23.
d
OBU_42759 and OBU_23.