Table 4-2.
Representative syndrome classification approaches.
| Category | Example approaches | Application |
|---|---|---|
| Manual grouping | Medical experts perform the mapping of laboratory test orders into syndrome categories (Ma et al., 2005). | The BioSense system (Bradley et al., 2005; Sokolow et al., 2005) and Syndromal Surveillance Tally Sheet program in EDs of Santa Clara County, California. |
| Natural language processing (NLP) | NLP-based approaches classify free-text CCs with simplified grammar containing rules for nouns, adjectives, prepositional phrases, and conjunctions. Critiques of NLP-based methods include lack of semantic markings in chief complaints and the amount of training needed. | As part of RODS, Chapman et al. adapted the MPLUS, a Bayesian network-based NLP system, to classify the free-text chief complaints (Chapman et al., 2005; Wagner et al., 2004a). |
| Bayesian classifiers | Bayesian classifiers, including naïve Bayesian classifiers, bigram Bayes, and their variations, can classify CCs learned from the training data consisting of labeled CCs. | The CoCo Bayesian classifier from the RODS project (Chapman et al., 2003) |
| Text string searching | A rule-based method that first uses keyword matching and synonym lists to standardize CCs. Predefined rules are then used to classify CCs or ICD-9 codes into syndrome categories. | EARS (Hutwagner et al., 2003), ESSENCE (CDC, 2003), and the National Bioterrorism Syndromic Surveillance Demonstration Program (Yih et al., 2005) |
| Vocabulary abstraction | This approach creates a series of intermediate abstractions up to a syndrome category from the individual data (e.g., signs) for syndromes due to an agent of bioterrorism. | The BioStorm system (Crubézy et al., 2005; Buckeridge et al., 2002; Shahar and Musen, 1996) |
| Ontology-based classification | A rule-based system that can generalize symptoms grouping rules based on UMLS-derived vocabularies and semantics. It provides a flexible architecture for changing or adapting new syndromic categories. | The syndromic mapping component of the BioPortal system (Lu et al., 2008) |