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. 2020 Sep 17;21:250. doi: 10.1186/s13059-020-02160-7

Fig. 4.

Fig. 4

Comparison between vg and bwa aln for indel detection. a Alternate allele observations at indels. b Comparison between vg graph and bwa aln in the detection of the CCR5 delta 32 deletion associated with HIV-1 resistance. Reads containing the deletion were mapped with vg in four ancient samples, but not with bwa