Table 2.
Individual Rate Constants and Errorsa
| Lower limitb | Upper Limitb | % rangec | Best fit | |
|---|---|---|---|---|
| f/f0d | 0.23 | 0.349 | 21% | 0.29 |
| Kde (μM) | 140 | 200 | 18% | 165 |
| k3 (s−1) | 97.2 | 140 | 18% | 116 |
| k4 (s−1) | 11.5 | 14.2 | 11% | 12.8 |
The data are fit globally to the mechanism shown in Scheme 4.
The upper and lower limits reflect a threshold of a 10% deviation from the minimal SSE in the confidence contours. FitSpace error confidence contours are shown in Figure 8 (19).
The percentage range was calculated by dividing the mean of the range by the best fit value as (upper − lower)/(2 × best fit). This reflects the allowable variation of each best fit value as a percentage.
The fluorescence scaling factor is shown as the fractional change in enzyme fluorescence (see the text).
The value for k1 (α-ketoglutarate binding) was assumed to be fast and held fixed at a lower limit of 5.5 × 106 M−1 s−1, so fitting to derive k2 defined only Kd.