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. Author manuscript; available in PMC: 2021 Sep 1.
Published in final edited form as: Cell Metab. 2020 Jul 28;32(3):353–365.e8. doi: 10.1016/j.cmet.2020.07.002

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Mouse anti-TXNIP MBL International K0205-3
Mouse anti-actin Abcam ab3280
Goat anti-mouse IgG-HRP Santa Cruz Biotechnology sc-2005
Rabbit anti-RNA polymerase II Abcam ab5131
Rabbit normal IgG Santa Cruz Biotechnology sc-2027
Rabbit anti-insulin Cell Signaling Technology 4590S
Alexa Fluor 488-conjugated anti-rabbit IgG Jackson ImmunoResearch Laboratories Inc 711-545-152
Mouse anti-glucagon MilliporeSigma G2654
Alexa Fluor 594-conjugated anti-mouse IgG Jackson ImmunoResearch Laboratories Inc 715-585-150
     
Chemicals
Type XI collagenase Sigma Aldrich C7657
Hanks’ balanced salt solution (HBSS) Corning 21-023-CM
0.02% radioimmunoassay-grade BSA Sigma Aldrich A7888
925-micron Spectra mesh filter Spectrum Labs 146410
Ficoll 400 Sigma Aldrich 9378
Secretagogues arginine Sigma Aldrich A6969-100G
Norepinephrine Sigma Aldrich A0937-5G
Lactate Sigma Aldrich L7022
Glucagon Sigma Aldrich G2044
Hydrogen chloride Thermo Fisher Scientific A144-500
Formaldehyde Sigma Aldrich F8775-500ML
Glycine Promega H5071
10% SDS Caliber GR155-1
Triton X-100 Promega H5141
1 M Tris-HCl (PH8.1) Thermo Fisher Scientific BP1758-500
5 M NaCl Promega V4221
Proteinase inhibitor cocktail tablet Roche 4693132001
Protein A-Sepharose Sigma Aldrich P3391
0.5 M EDTA Thermo Fisher Scientific BP2482-500
Lithium Chloride Thermo Fisher Scientific L121-100
NP-40 US Biological N3500
Deoxycholate Sigma Aldrich 264101-100GM
NaHCO3 Boston BioProducts BB-2612
Proteinase K Thermo Fisher Scientific AM2546
Streptozocin Sigma Aldrich S0130
Metformin Sigma Aldrich D150959-5G
Empagliflozin Sigma Aldrich A112500-5G
Human insulin Eli Lilly N/A
Periodic acid Sigma Aldrich P7875
Schiff Reagent Sigma Aldrich 3952016
Mayer’s Hematoxylin Solution Sigma Aldrich MHS 16
[3-3H]glucose PerkinElmer NET331C005MC
2-deoxy-D-[1-14C]glucose (2-[14C]DG) PerkinElmer NEC495001MC
SRI-37330 Southern Research/this paper N/A
     
Critical Commercial Assays
Dual-Luciferase Reporter Assay System Promega E1960
Cell Titer-Glo Luminescent Cell Viability Assay Kit Promega G7571
RNeasy 96 Kit Qiagen 74181
QuantiFast SYBR Green RT-PCR Kit Qiagen 204154
Mouse Glucagon ELISA Kit Crystal Chem 81518
Pierce BCA Protein Assay Thermo Fisher Scientific 23227
Glucose Colorimetric Detection Kit Thermo Fisher Scientific EIAGLUC
cAMP Direct Immunoassay Kit Abcam ab65355
miRNeasy Mini Kit Qiagen 217004
First strand cDNA synthesis Kit Roche 04896866001
PCR product purification kit Qiagen 28106
Mouse Ultrasensitive Insulin ELISA Kit ALPCO 80-INSMSU-E01
Serum Triglyceride Assay Kit Abcam ab65336
ALT Activity Assay Sigma Aldrich MAK052
Mouse Glucose Assay Kit Crystal Chem 81692
Glycogen Colorimetric Assay Kit Abcam ab65620
Mouse on Mouse Detection Kit Vector Laboratories Inc BMK-2202
     
Deposited Data
RNA sequencing data GEO GSE151588
     
Experimental Models: Cell Lines
Rat INS-1 beta-like cells Asfari et al., 1992 N/A
Mouse αTC1-6 alpha cells ATCC ATCC CRL-2934
     
Experimental Models: Organisms/Strains
C57BL/6J mice The Jackson Laboratory 000664
GcgR-/-L mice Kim et al., 2018 N/A
Whole body Txnip-/- mice Chen et al., 2008a N/A
B6.BKS(D) – Leprdb/J (db/db) mice The Jackson Laboratory 000697
Human islets Integrated Islet Distribution Program (IIDP) N/A
     
Oligonucleotides
Mouse TXNIP siRNA Dharmacon, Horizon Discovery L-040441-01-0005
Scramble control siRNA Dharmacon, Horizon Discovery D-001810-01-20
Primers Sigma Aldrich/this paper Supplemental Table S2
     
Plasmids
pGL4.17 [luc2/Neo] vector Promega E6721
TXNIP expression plasmid Minn et al. 2005 N/A
human TXNIP promoter plasmid (full length & deletions) Minn et al. 2005 N/A
SV40 E-box plasmid Minn et al. 2005 N/A
pRL-TK control plasmid Promega E2231
     
Software and Algorithms
StarDrop Optibrium https://www.optibrium.com/
ImageQuant TL GE Healthcare N/A
STAR (v2.4.2a) N/A N/A
Salmon (v0.8.2) N/A N/A
DESeq2 Bioconductor https://www.bioconductor.org/
cellSens Dimension Imaging Olympus Corporation N/A
SAS 9.4 SAS https://www.sas.com/
     
Other
DharmaFECT Duo transfection reagent Dharmacon, Horizon Discovery T-2010-03
DharmaFECT 1 transfection reagent Dharmacon, Horizon Discovery T-2001-03
ECL Plus Western Blotting Reagents GE Healthcare 45-002-401
RPMI 1640 with glucose Thermo Fisher Scientific 11875119
RPMI 1640 without glucose Thermo Fisher Scientific 11879020
Dulbecco’s Modified Eagle Medium Thermo Fisher Scientific 11966025
DMEM, no glucose, no glutamine, no phenol red Thermo Fisher Scientific A1443001
Geneticin Thermo Fisher Scientific 10131027
Fetal Bovine Serum Thermo Fisher Scientific 16140071
Pen/Strep Thermo Fisher Scientific 15140122
HEPES solution Thermo Fisher Scientific 15630130
Sodium Pyruvate Thermo Fisher Scientific 11360070
L-glutamine Sigma Aldrich G3126
2-Mercaptoethanol Thermo Fisher Scientific 19470583
D(+)-Glucose Thermo Fisher Scientific AC410955000
Trypsin-EDTA (0.25%) Thermo Fisher Scientific 25200056
Phosphate-Buffered Saline Thermo Fisher Scientific 10010023
Novex 10–20% Tris-Glycine Mini Gels Thermo Fisher Scientific XP10202BOX