Antibodies |
Mouse anti-TXNIP |
MBL International |
K0205-3 |
Mouse anti-actin |
Abcam |
ab3280 |
Goat anti-mouse IgG-HRP |
Santa Cruz Biotechnology |
sc-2005 |
Rabbit anti-RNA polymerase II |
Abcam |
ab5131 |
Rabbit normal IgG |
Santa Cruz Biotechnology |
sc-2027 |
Rabbit anti-insulin |
Cell Signaling Technology |
4590S |
Alexa Fluor 488-conjugated anti-rabbit IgG |
Jackson ImmunoResearch Laboratories Inc |
711-545-152 |
Mouse anti-glucagon |
MilliporeSigma |
G2654 |
Alexa Fluor 594-conjugated anti-mouse IgG |
Jackson ImmunoResearch Laboratories Inc |
715-585-150 |
|
|
|
Chemicals |
Type XI collagenase |
Sigma Aldrich |
C7657 |
Hanks’ balanced salt solution (HBSS) |
Corning |
21-023-CM |
0.02% radioimmunoassay-grade BSA |
Sigma Aldrich |
A7888 |
925-micron Spectra mesh filter |
Spectrum Labs |
146410 |
Ficoll 400 |
Sigma Aldrich |
9378 |
Secretagogues arginine |
Sigma Aldrich |
A6969-100G |
Norepinephrine |
Sigma Aldrich |
A0937-5G |
Lactate |
Sigma Aldrich |
L7022 |
Glucagon |
Sigma Aldrich |
G2044 |
Hydrogen chloride |
Thermo Fisher Scientific |
A144-500 |
Formaldehyde |
Sigma Aldrich |
F8775-500ML |
Glycine |
Promega |
H5071 |
10% SDS |
Caliber |
GR155-1 |
Triton X-100 |
Promega |
H5141 |
1 M Tris-HCl (PH8.1) |
Thermo Fisher Scientific |
BP1758-500 |
5 M NaCl |
Promega |
V4221 |
Proteinase inhibitor cocktail tablet |
Roche |
4693132001 |
Protein A-Sepharose |
Sigma Aldrich |
P3391 |
0.5 M EDTA |
Thermo Fisher Scientific |
BP2482-500 |
Lithium Chloride |
Thermo Fisher Scientific |
L121-100 |
NP-40 |
US Biological |
N3500 |
Deoxycholate |
Sigma Aldrich |
264101-100GM |
NaHCO3
|
Boston BioProducts |
BB-2612 |
Proteinase K |
Thermo Fisher Scientific |
AM2546 |
Streptozocin |
Sigma Aldrich |
S0130 |
Metformin |
Sigma Aldrich |
D150959-5G |
Empagliflozin |
Sigma Aldrich |
A112500-5G |
Human insulin |
Eli Lilly |
N/A |
Periodic acid |
Sigma Aldrich |
P7875 |
Schiff Reagent |
Sigma Aldrich |
3952016 |
Mayer’s Hematoxylin Solution |
Sigma Aldrich |
MHS 16 |
[3-3H]glucose |
PerkinElmer |
NET331C005MC |
2-deoxy-D-[1-14C]glucose (2-[14C]DG) |
PerkinElmer |
NEC495001MC |
SRI-37330 |
Southern Research/this paper |
N/A |
|
|
|
Critical Commercial Assays |
Dual-Luciferase Reporter Assay System |
Promega |
E1960 |
Cell Titer-Glo Luminescent Cell Viability Assay Kit |
Promega |
G7571 |
RNeasy 96 Kit |
Qiagen |
74181 |
QuantiFast SYBR Green RT-PCR Kit |
Qiagen |
204154 |
Mouse Glucagon ELISA Kit |
Crystal Chem |
81518 |
Pierce BCA Protein Assay |
Thermo Fisher Scientific |
23227 |
Glucose Colorimetric Detection Kit |
Thermo Fisher Scientific |
EIAGLUC |
cAMP Direct Immunoassay Kit |
Abcam |
ab65355 |
miRNeasy Mini Kit |
Qiagen |
217004 |
First strand cDNA synthesis Kit |
Roche |
04896866001 |
PCR product purification kit |
Qiagen |
28106 |
Mouse Ultrasensitive Insulin ELISA Kit |
ALPCO |
80-INSMSU-E01 |
Serum Triglyceride Assay Kit |
Abcam |
ab65336 |
ALT Activity Assay |
Sigma Aldrich |
MAK052 |
Mouse Glucose Assay Kit |
Crystal Chem |
81692 |
Glycogen Colorimetric Assay Kit |
Abcam |
ab65620 |
Mouse on Mouse Detection Kit |
Vector Laboratories Inc |
BMK-2202 |
|
|
|
Deposited Data |
RNA sequencing data |
GEO |
GSE151588 |
|
|
|
Experimental Models: Cell Lines |
Rat INS-1 beta-like cells |
Asfari et al., 1992 |
N/A |
Mouse αTC1-6 alpha cells |
ATCC |
ATCC CRL-2934 |
|
|
|
Experimental Models: Organisms/Strains |
C57BL/6J mice |
The Jackson Laboratory |
000664 |
GcgR-/-L mice |
Kim et al., 2018 |
N/A |
Whole body Txnip-/- mice |
Chen et al., 2008a |
N/A |
B6.BKS(D) – Leprdb/J (db/db) mice |
The Jackson Laboratory |
000697 |
Human islets |
Integrated Islet Distribution Program (IIDP) |
N/A |
|
|
|
Oligonucleotides |
Mouse TXNIP siRNA |
Dharmacon, Horizon Discovery |
L-040441-01-0005 |
Scramble control siRNA |
Dharmacon, Horizon Discovery |
D-001810-01-20 |
Primers |
Sigma Aldrich/this paper |
Supplemental Table S2 |
|
|
|
Plasmids |
pGL4.17 [luc2/Neo] vector |
Promega |
E6721 |
TXNIP expression plasmid |
Minn et al. 2005 |
N/A |
human TXNIP promoter plasmid (full length & deletions) |
Minn et al. 2005 |
N/A |
SV40 E-box plasmid |
Minn et al. 2005 |
N/A |
pRL-TK control plasmid |
Promega |
E2231 |
|
|
|
Software and Algorithms |
StarDrop |
Optibrium |
https://www.optibrium.com/ |
ImageQuant TL |
GE Healthcare |
N/A |
STAR (v2.4.2a) |
N/A |
N/A |
Salmon (v0.8.2) |
N/A |
N/A |
DESeq2 |
Bioconductor |
https://www.bioconductor.org/ |
cellSens Dimension Imaging |
Olympus Corporation |
N/A |
SAS 9.4 |
SAS |
https://www.sas.com/ |
|
|
|
Other |
DharmaFECT Duo transfection reagent |
Dharmacon, Horizon Discovery |
T-2010-03 |
DharmaFECT 1 transfection reagent |
Dharmacon, Horizon Discovery |
T-2001-03 |
ECL Plus Western Blotting Reagents |
GE Healthcare |
45-002-401 |
RPMI 1640 with glucose |
Thermo Fisher Scientific |
11875119 |
RPMI 1640 without glucose |
Thermo Fisher Scientific |
11879020 |
Dulbecco’s Modified Eagle Medium |
Thermo Fisher Scientific |
11966025 |
DMEM, no glucose, no glutamine, no phenol red |
Thermo Fisher Scientific |
A1443001 |
Geneticin |
Thermo Fisher Scientific |
10131027 |
Fetal Bovine Serum |
Thermo Fisher Scientific |
16140071 |
Pen/Strep |
Thermo Fisher Scientific |
15140122 |
HEPES solution |
Thermo Fisher Scientific |
15630130 |
Sodium Pyruvate |
Thermo Fisher Scientific |
11360070 |
L-glutamine |
Sigma Aldrich |
G3126 |
2-Mercaptoethanol |
Thermo Fisher Scientific |
19470583 |
D(+)-Glucose |
Thermo Fisher Scientific |
AC410955000 |
Trypsin-EDTA (0.25%) |
Thermo Fisher Scientific |
25200056 |
Phosphate-Buffered Saline |
Thermo Fisher Scientific |
10010023 |
Novex 10–20% Tris-Glycine Mini Gels |
Thermo Fisher Scientific |
XP10202BOX |
|
|
|