Table 1.
Breakpoint junctions and characterization of molecular signature
| Breakpoint junction | Genomic coordinate (prox end) | Genomic coordinate (distal end) | BL/INS/ MH | Size (bp) | Source |
|---|---|---|---|---|---|
| der5_jct1 | 6:52164816 | 5:66424678 | MH | 4 | NR |
| der5_jct2 | 5:66416578 | 6:54477651 | BL | - | NR |
| der5_jct3 | 6:54468957 | 6:55440339 | BL | - | NR |
| der5_jct4 | 6:55549994 | 6:54532787 | MH | 5 | NR |
| der5_jct5 | 6:54477667 | 5:37060348 | INS | 16 | NR |
| der5_jct6 | 5:66416448 | 6:54144313 | BL | - | NR |
| der5_jct7 | 6:52268476 | 6:54160494 | INS | 91 | NA |
| der5_jct8 | 6:54160401 | 7:123818519 | INS | 71 | chr6:55419517–55419557 [41bp]; chr6:52268424–52268448 [25bp] |
| der6_jct1 | 5:37060326 | 6:55440329 | INS | 25 | NA |
| der6_jct2 | 6:55419612 | 6:54233402 | MH | 2 | NR |
| der6_jct3 | 6:54468932 | 6:54144318 | INS | 8 | NR |
| der6_jct4 | 6:54160398 | 5:66424725 | INS | 32 | NA |
| der6_jct5 | 5:66444130 | 6:55550005 | INS | 83 | chr6:52266027–52266050 [24bp] |
| der7_jct1 | 7:123818492 | 5:66449983 | MH | 1 | NR |
| der7_jct2 | 5:66463171 | 6:54233319 | MH | 2 | NR |
| der7_jct3 | 6:54160547 | 5:68215114 | INS | 117 | NA |
| der7_jct4 | 5:66463179 | 5:68215535 | BL | - | NR |
| der21_jct1 | 21:14598180 | 6:52268420 | INS | 43 | chr6:54160487–54160508 [22bp] |
| der21_jct2 | 6:52266075 | 6:54532789 | MH | 1 | NR |
| der21_jct3 | 6:55416595 | 5:66444415 | INS | 111 | chr6:55419496–55419523 [28bp]; chr6:55419553–55419573 [21bp] |
| der21_jct4 | 5:66449980 | 6:55416610 | BL | - | NR |
| der21_jct5 | 6:55419503 | 6:52266036 | INS | 4 | NR |
| der21_jct6 | 6:52164824 | 21:14598357 | BL | - | NR |
Abbreviations: BL - blunt, INS - insertion, MH - microhomology, NA - not available, NR- not relevant