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. 2020 Sep 21;18:358. doi: 10.1186/s12967-020-02534-2

Table 2.

Spike gene nucleotide identity percent among different representative coronaviruses and human SARS-CoV-2

1 2 3 4 5 6 7 8 9 10 11 12 13
1-SARS-CoV-2 Reference genome 100 99.92 99.97 99.97 99.97 99.56 72.16 92.86 83.77 83.23 74.99 75.51 72.54
2-Mink SARS-CoV-2/NB04 EPI_ISL_447634 99.92 100 99.95 99.95 99.95 99.48 72.09 92.78 83.74 83.18 74.91 75.43 72.49
3-Dog SARS-CoV-2/HKG/20-03695/2020 99.97 99.95 100 100 100 99.53 72.14 92.83 83.74 83.20 74.96 75.48 72.52
4-Tiger SARS-CoV-2/USA/NY-040420 EPI_ISL_420293 99.97 99.95 100 100 100 99.53 72.14 92.83 83.74 83.20 74.96 75.48 72.52
5-Cat SARS-CoV-2 EPI_ISL_437349 99.97 99.95 100 100 100 99.53 72.14 92.83 83.74 83.20 74.96 75.48 72.52
6-Mouse SARS-CoV-2/HRB-26 m EPI_ISL_459910 99.56 99.48 99.53 99.53 99.53 100 72.04 92.49 83.40 83.44 74.78 75.30 72.36
7-Bat coronavirus RmYN02 EPI ISL 412977 72.16 72.09 72.14 72.14 72.14 72.04 100 71.50 70.26 69.28 73.01 72.80 69.52
8-Bat coronavirus RaTG13 92.86 92.78 92.83 92.83 92.83 92.49 71.50 100 83.25 82.76 75.85 76.01 72.53
9-Pangolin coronavirus EPI ISL 410721 83.77 83.74 83.74 83.74 83.74 83.40 70.26 83.25 100 79.69 79.17 79.44 72.19
10-Pangolin coronavirus PCoV GX-P5L 83.23 83.18 83.20 83.20 83.20 83.44 69.28 82.76 79.69 100 74.61 75.16 72.32
11-Bat SARS-like coronavirus CoVZXC21 74.99 74.91 74.96 74.96 74.96 74.78 73.01 75.85 79.17 74.61 100 96.95 71.83
12-Bat SARS-like coronavirus CoVZC45 75.51 75.43 75.48 75.48 75.48 75.30 72.80 76.01 79.44 75.16 96.95 100 71.67
13-SARS coronavirus civet010 72.54 72.49 72.52 72.52 72.52 72.36 69.52 72.53 72.19 72.32 71.83 71.67 100