Table 2.
Genome annotations for AXL3 obtained from BLASTp and CD-Search data. Results below 1.00 × 10−3 were not recorded and the function was annotated as hypothetical.
| CDS | Coding Region | Strand | Length (AA) | Putative Function | Hit | Species | Coverage (%) | E-Value | Identity (%) | Accession |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 204–806 | + | 200 | hypothetical protein | hypothetical protein | Burkholderia sp. SRS-W-2-2016 | 40 | 3.00 × 10−4 | 35.56 | WP_143752284.1 |
| 2 | 806–2368 | + | 520 | large terminase | terminase large subunit | Microcystic phage Me-ZS1 | 95 | 0 | 59.96 | AZF88145.1 |
| 3 | 2379–3887 | + | 502 | portal protein | putative portal protein | Prokaryotic dsDNA virus sp. | 97 | 2.00 × 10−141 | 47.7 | QDP56576.1 |
| 4 | 3891–4952 | + | 353 | head morphogenesis protein | hypothetical protein | uncultured Caudovirales phage | 98 | 1.00 × 10−91 | 44.17 | ASN68636.1 |
| 5 | 4998–5156 | + | 52 | hypothetical protein | - | |||||
| 6 | 5177–5911 | + | 244 | scaffold protein | scaffold protein | Pseudomonas phage vB_PaeS_SCH_Ab26 | 99 | 6.00 × 10−41 | 41.3 | YP_009044344.1 |
| 7 | 5946–6962 | + | 338 | capsid protein | capsid protein | Salmonella phage PMBT28 | 98 | 8.00 × 10−124 | 51.46 | AUZ95497.1 |
| 8 | 7041–7340 | + | 99 | hypothetical protein | - | |||||
| 9 | 7347–7871 | + | 174 | structural protein | structural protein | Achromobacter phage vB_Ade_ART | 99 | 1.00 × 10−32 | 45.56 | AYD82587.1 |
| 10 | 7876–8259 | + | 127 | head-tail joining protein | hypothetical protein | Pseudomonas phage PaSz-4 | 100 | 4.00 × 10−14 | 32.56 | QAX99460.1 |
| 11 | 8256–8687 | + | 143 | structural protein | putative structural protein | Pseudomonas phage PAE1 | 94 | 3.00 × 10−33 | 41.55 | YP_009215709.1 |
| 12 | 8692–10,245 | + | 517 | major tail structural protein | major tail structural protein | Pseudomonas phage NP1 | 98 | 0 | 65.36 | YP_009285827.1 |
| 13 | 10,272–10,691 | + | 139 | structural protein | putative structural protein | Pseudomonas phage NP1 | 100 | 4.00 × 10−56 | 57.55 | YP_009285828.1 |
| 14 | 10,712–11,071 | + | 119 | hypothetical protein | hypothetical protein | Pseudomonas phage LKO4 | 73 | 9.00 × 10−27 | 54.02 | YP_009601866.1 |
| 15 | 11,068–11,496 | + | 142 | hypothetical protein | hypothetical protein | Bordetella phage FP1 | 98 | 2.00 × 10−37 | 50 | YP_009794086.1 |
| 16 | 11,501–14,341 | + | 946 | tape measure protein | hypothetical protein | Pseudomonas virus M6 | 98 | 0 | 47.08 | YP_001294539.1 |
| 17 | 14,352–15,296 | + | 314 | tail assembly protein | tail assembly protein | Xylella phage Salvo | 99 | 6.00 × 10−133 | 58.72 | YP_009639180.1 |
| 18 | 15,296–16,279 | + | 327 | hypothetical protein | hypothetical protein | Stenotrophomonas phage vB_SmaS-DLP_1 | 98 | 1.00 × 10−72 | 42.04 | AKI28800.1 |
| 19 | 16,282–18,018 | + | 578 | hypothetical protein | hypothetical protein | Pseudomonas phage vB_PaeS_C1 | 91 | 2.00 × 10−115 | 36.84 | AVJ48097.1 |
| 20 | 18,015–18,854 | + | 279 | hypothetical protein | hypothetical protein | Burkholderia phage vB_BceS_KL1 | 99 | 3.00 × 10−80 | 45.68 | YP_006560776.1 |
| 21 | 18,858–21,968 | + | 1036 | central tail hub | tail protein | Burkholderia phage vB_BceS_KL1 | 77 | 0 | 46.73 | YP_006560777.1 |
| 22 | 21,965–22,138 | + | 57 | hypothetical protein | - | |||||
| 23 | 22,135–22,584 | + | 149 | endolysin | endolysin | Xanthomonas phage Xp15 | 98 | 2.00 × 10−53 | 53.9 | YP_239293.1 |
| 24 | 22,590–23,021 | + | 143 | hypothetical protein | - | |||||
| 25 | 23,018–23,323 | + | 101 | hypothetical protein | hypothetical protein | Sinobacteraceae bacterium | 92 | 1.00 × 10−9 | 40 | TXH02718.1 |
| 26 | 23,579–23,941 | + | 120 | hypothetical protein | - | |||||
| 27 | 24,050–24,571 | − | 173 | dCMP deaminase | dCMP deaminase | uncultured Mediterranean phage uvMED | 91 | 6.00 × 10−43 | 47.17 | YP_009778145.1 |
| 28 | 24,942–25,751 | − | 269 | thymidylate synthase | thymidylate synthase | Pelagibacter phage HTVC200P | 87 | 6.00 × 10−65 | 44.49 | AXH71582.1 |
| 29 | 25,732–26,715 | − | 327 | thymidylate kinase | thymidylate kinase | Caudovirales sp. ctOwN3 | 93 | 3.00 × 10−33 | 33.98 | QGH72154.1 |
| 30 | 26,696–27,250 | − | 184 | nucleoside triphosphate pyrophosphohydrolase | NTP-Ppase | Caudovirales sp. ctOwN3 | 69 | 5.00 × 10−32 | 46.21 | QGH72159.1 |
| 31 | 27,260–28,084 | − | 274 | methyltransferase | methyltransferase domain-containing protein | Nitrospira cf. moscoviensis SBR1015 | 94 | 5.00 × 10−133 | 73.08 | WP_087475488.1 |
| 32 | 28,162–28,761 | − | 199 | hypothetical protein | hypothetical protein | Nitrospira cf. moscoviensis SBR1015 | 74 | 3.00 × 10−26 | 44.13 | WP_087475489.1 |
| 33 | 29,100–29,273 | − | 57 | hypothetical protein | - | |||||
| 34 | 29,273–29,920 | − | 215 | hypothetical protein | - | |||||
| 35 | 29,997–30,089 | − | 30 | hypothetical protein | - | |||||
| 36 | 30,100–30,375 | − | 91 | hypothetical protein | hypothetical protein | Xanthomonas phage Xoo-sp2 | 93 | 4.00 × 10−20 | 48.24 | ANT45253.1 |
| 37 | 30,379–30,588 | − | 69 | hypothetical protein | - | |||||
| 38 | 30,700–32,256 | − | 518 | DNA helicase | hypothetical protein | Prokaryotic dsDNA virus sp. | 91 | 4.00 × 10−123 | 44.49 | QDP55885.1 |
| 39 | 32,463–32,690 | − | 75 | hypothetical protein | - | |||||
| 40 | 32,678–33,532 | − | 284 | RecB family exonuclease/Cas4 | putative RecB family exonuclease | Campylobacter phage vB_CjeM_Los1 | 84 | 1.00 × 10−10 | 27.31 | YP_009597155.1 |
| 41 | 33,532–35,457 | − | 641 | DNA polymerase I | DNA polymerase A | Vibrio phage VpKK5 | 71 | 1.00 × 10−29 | 27.62 | YP_009126593.1 |
| 42 | 35,454–35,672 | − | 72 | hypothetical protein | hypothetical protein | Sandarakinorhabdus limnophila | 72 | 4.00 × 10−5 | 46.15 | WP_022681046.1 |
| 43 | 35,750–36,652 | − | 300 | hypothetical protein | hypothetical protein | Pseudomonas phage KPP25 | 72 | 4.00 × 10−12 | 24.55 | YP_009030602.1 |
| 44 | 36,720–37,232 | − | 170 | hypothetical protein | hypothetical protein | Nitrospira cf. moscoviensis SBR1015 | 76 | 9.00 × 10−35 | 52.31 | WP_087475496.1 |
| 45 | 37,232–37,702 | − | 156 | hypothetical protein | - | |||||
| 46 | 37,789–38,694 | − | 301 | DNA ligase | DNA ligase | Xanthomonas phage Xoo-sp2 | 99 | 3.00 × 10−81 | 45 | ANT45243.1 |
| 47 | 38,691–39,158 | − | 155 | hypothetical protein | hypothetical protein | Microcystic phage Me-ZS1 | 92 | 1.00 × 10−25 | 40.28 | AZF88158.1 |
| 48 | 39,155–39,403 | − | 82 | hypothetical protein | hypothetical protein | Cupriavidus sp. UYMSc13B | 100 | 3.00 × 10−9 | 37.35 | RWA55322.1 |
| 49 | 39,405–39,674 | − | 89 | hypothetical protein | - | |||||
| 50 | 39,667–40,515 | − | 282 | thymidylate synthase complementing protein | thimidilate synthase | Caulobacter phage Seuss | 98 | 3.00 × 10−66 | 43.77 | YP_009785564.1 |
| 51 | 40,505–40,747 | − | 80 | hypothetical protein | - | |||||
| 52 | 40,816–41,031 | − | 71 | hypothetical protein | - | |||||
| 53 | 41,028–41,546 | − | 172 | hypothetical protein | hypothetical protein | Mycobacterium phage OkiRoe | 56 | 4.00 × 10−9 | 36.61 | YP_009043654.1 |
| 54 | 41,548–41,745 | − | 65 | hypothetical protein | - | |||||
| 55 | 41,742–42,221 | − | 159 | DUF1643 containing protein | hypothetical protein | Pseudomonas phage Epa33 | 95 | 2.00 × 10−47 | 53.85 | QIQ65784.1 |
| 56 | 42,218–42,520 | − | 100 | hypothetical protein | hypothetical protein | Xylella phage Sano | 99 | 3.00 × 10−16 | 42.16 | YP_009639092.1 |
| 57 | 42,517–42,801 | − | 94 | hypothetical protein | - | |||||
| 58 | 42,830–42,973 | − | 47 | hypothetical protein | - | |||||
| 59 | 42,970–43,182 | − | 70 | hypothetical protein | - | |||||
| 60 | 43,179–43,514 | − | 111 | DnaJ domain-containing protein | DnaJ domain-containing protein | Pseudoalteromonas sp. FUC4 | 53 | 2.00 × 10−5 | 38.33 | WP_149594670.1 |
| 61 | 43,511–43,693 | − | 60 | hypothetical protein | - | |||||
| 62 | 43,756–44,055 | − | 99 | Glu-rich hypothetical protein | - | |||||
| 63 | 44,148–44,369 | − | 73 | hypothetical protein | - | |||||
| 64 | 44,463–46,577 | − | 704 | Primase | putative primase | Stenotrophomonas phage S1 | 33 | 4.00 × 10−28 | 32.91 | YP_002321451.1 |
| 65 | 46,876–47,385 | − | 169 | hypothetical protein | - |