Table 2.
Patient | Sex | Onset age | Diagnosis age | Electroclinical syndrome | Type of seizures | Variant | FHx of seizure | DD/ID | Febrile seizure | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene | Inherit | Refseq a | c.DNA | Amino acid | ACMG b | |||||||||
E‐001 | F | 4 m | 2 y 10 m | Dravet syndrome |
FT GT |
PCDH19 | XL | NM_001184880.1 | c.370G>T c | p.(Asp124Tyr) | LP | Mother | Mild | Yes |
E‐002 | F | 4 m | 2 y 9 m | Dravet syndrome |
FIA FHC GAA |
SCN1A | AD | NM_001165963.2 | c.5596del c | p.(Asp1866fIlesTer11) | P | None | Severe | Yes |
E‐010 | F | 6 m | 7 y | Dravet syndrome |
FHC GAA |
SCN1A | AD | NM_001165963.2 | c.602+1G>C c | NA | LP | None | Severe | Yes |
E‐037 | M | 5 m | 9 y 9 m | Dravet syndrome |
GM GMA FHC |
SCN1A | AD | NM_001165963.2 | c.1088C>G | p.(Thr363Arg) | P | None | Severe | Yes |
E‐039 | F | 11 m | 9 y 8 m | Dravet syndrome |
GTC FTC |
PCDH19 | XL | NM_001184880.1 | c.1998del | p.(Asp667MetfsTer9) | LP | None | Mild | Yes |
E‐044 | M | 5 m | 12 y 7 m | Dravet syndrome |
GTC FHC FIA |
SCN1A | AD | NM_001165963.2 | c.580G>A | p.(Asp194Asn) | LP | None | Severe | Yes |
E‐051‐P | M | 4 m | 1 y 2 m | BFIE |
FIA GTC |
PRRT2 | AD | NM_145239.2 | c.971del | p.(Gly324GlufsTer13) | P | Sibling | Normal | None |
E‐051‐S | F | 4 m | 7 y 3 m | BFIE |
FIA GTC |
PRRT2 | AD | NM_145239.2 | c.971del | p.(Gly324GlufsTer13) | P | Sibling | Normal | None |
E‐076 | M | 6 m | 16 y 4 m | Dravet syndrome |
GTC FHK FIA |
SCN1A | AD | NM_001165963.2 | c.1178G>A | p.(Arg393His) | P | None | Severe | Yes |
E‐079 | M | 3 d | 2 y 9 m | BFNS | GT | KCNQ2 | AD | NM_172107.3 | c.1771C>T c | p.(Gln591Ter) | P | Sibling | Normal | None |
E‐092 | F | 6 m | 11 y 4 m | Dravet syndrome |
GT FIA FM w V |
SCN1A | AD | NM_001165963.2 | c.2589+3A>T | NA | P | None | Severe | Yes |
E‐100 | M | 2 d | 9 y 3 m | Dravet syndrome |
FHC FHK GT |
SCN1A | AD | NM_001165963.2 | c.4723C>T | p.(Arg1575Cys) | LP | None | Severe | Yes |
E‐103 | F | 6 m | 6 y 2 m | Dravet syndrome |
FHC GM GTC |
SCN1A | AD | NM_001165963.2 | c.264+5G>C | NA | LP | Aunt | Severe | Yes |
E‐104 | M | 5 m | 8 y 11 m | Dravet syndrome |
FHC FM w V GTC |
SCN1A | AD | NM_001165963.2 | c.4242C>G c | p.(Asn414Lys) | LP | None | Severe | Yes |
E‐121 | M | 3 m | 20 y | Dravet syndrome |
GM GT |
SCN1A | AD | NM_001165963.2 | c.846del c | p.(Thr283ProfsTer10) | LP | None | Severe | Yes |
E‐122 | M | 4 m | 10 y 3 m | EOEE |
IS FM GT |
ARX | XLR | NM_139058.2 | c.1146G>C c | p.(Lys382Asn) | LP | Cousin | Severe | None |
E‐129 | M | 3 m | 17 y 6 m | Dravet syndrome |
GT GM FHC |
SCN1A | AD | NM_001165963.2 | c.2589+3A>T | NA | LP | None | Severe | Yes |
E‐142 | F | 6 m | 11 m | Dravet syndrome |
GTC FIA |
SCN1A | AD | NM_001165963.2 | c.235G>A | p.(Asp79Asn) | LP | Cousin | Moderate | Yes |
E‐147 | F | 1 m | 10 y | EOEE |
IS GM FC |
STXBP1 | AD | NM_003165.3 | c.994_1003del c | p.(Lys332LeufsTer21) | P | None | Severe | None |
E‐153 | F | 5 m | 8 y 4 m | Dravet syndrome |
FHC FIA GTC |
SCN1A | AD | NM_001165963.2 | c.2415+5G>A | NA | LP | None | Severe | Yes |
E‐155 | M | 5 m | 7 m | BFIE |
FIA FHC |
PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | None | Normal | None |
E‐170 | F | 4 m | 5 m | EOEE | GT | KCNQ2 | AD | NM_172109.3 | c.773A>G | p.(Asn258Ser) | LP | None | Moderate | None |
E‐180 | F | 6 m | 8 y 5 m | Dravet syndrome |
GT FHC |
SCN1A | AD | NM_001165963.2 | c.2792G>A | p.(Arg931His) | LP | Aunt | Severe | Yes |
E‐199 | M | 6 m | 10 y | BFIE/PKD |
FIA GT |
PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | None | Normal | None |
E‐200 | F | 6 m | 10 m | BFIE | GT | PRRT2 | AD | NM_145239.2 | c.650del | p.(Arg217GlnfsTer12) | P | None | Normal | None |
E‐204 | M | 9 m | 1 y 10 m | EOEE |
GA GTC |
SCN8A | AD | NM_014191.3 | c.778T>G c | p.(Phe260Val) | LP | None | Severe | None |
E‐214 | M | 10 m | 12 y 4 m | EOEE |
GM GT FIA |
ARX | XLR | NM_139058.2 | c.1135C>T c | p.(Arg379Cys) | LP | Father | Severe | None |
E‐218 | M | 4 m | 5 m | BFIE | GTC | PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | Sibling | Normal | None |
E‐220‐P | F | 3 m | 5 m | BFIE |
GTC FC |
PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | Sibling | Normal | None |
E‐220‐S1 | F | 3 m | 6 y 4 m | BFIE | GT | PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | Sibling | Normal | None |
E‐221 | M | 6 m | 18 y 7 m | Dravet syndrome |
FHC GTC FIA |
SCN1A | AD | NM_001165963.2 | c.5341T>G | p.(Tyr1781Asp) | LP | Cousin | Severe | Yes |
E‐230 | M | 12 m | 3 y 7 m | GEFSP | GT | SCN1A | AD | NM_001165963.2 | c.5671G>T c | p.(Glu1891Ter) | P | None | Normal | Yes |
E‐234 | F | 4 m | 3 y | Unclassified |
GT FHC |
DEPDC5 | AD | NM_001242896.1 | c.3802C>T | p.(Arg1268Ter) | LP | None | Normal | Yes |
E‐244 | M | 5 d | 3 m | BFNS |
FHC GT |
SCN2A | AD | NM_021007.2 | c.4712T>C | p.(Ile1571Thr) | LP | None | Normal | None |
E‐251 | F | 4 m | 1 y | BFIE |
FIA GT |
PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | Aunt | Normal | None |
E‐258‐P | M | 2 m | 6 m | EOEE |
FIA IS |
ARX | XLR | NM_139058.2 | c.1146G>C c | p.(Lys382Asn) | LP | Cousin | Severe | None |
E‐283 | M | 4 m | 5 m | BFIE | GT | PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P |
Mother Cousin |
Normal | None |
E‐294 | M | 4 m | 4 m | BFIE |
FHC GTC |
PRRT2 | AD | NM_145239.2 | c.649dupC | p.(Arg217ProfsTer8) | P | Sibling | Normal | None |
E‐391 | M | 2 d | 2 m | EOEE |
FIA GT |
SCN2A | AD | NM_021007.2 | c.5645G>A | p.(Arg1882Gln) | P | None | Severe | None |
E‐392 | M | 1 d | 1 m | EOEE |
GT FT |
SCN2A | AD | NM_021007.2 | c.4609A>T | p.(Ile537Phe) | LP | None | Severe | None |
Abbreviations: AD, autosomal dominant; BFIE, benign familial infantile epilepsy; BFNS, benign familial neonatal seizure; d, days; DD, developmental delay; EOEE, early‐onset epileptic encephalopathy; FHC, focal hemiclonic; FHK, focal hyperkinetic; FHx, family history; FIA, focal impaired awareness; FM w V, focal motor with version; FM, focal motor; FT, focal tonic; GAA, generalized atypical absence; GEFSP, generalized epilepsy with febrile seizure plus; GM, generalized myoclonic; GMA, generalized myoclonic absence; GT, generalized tonic; GTC, generalized tonic clonic; ID, intellectual disability; IS, infantile spasms; LP, likely pathogenic; m, months; NA, not available; P, pathogenic; PKD, paroxysmal kinesigenic dyskinesia; XL, X‐linked; XLR, X‐linked recessive; y, year.
The sequencing reads were aligned to the human genome reference (GRCh37: Genome Reference Consortium human build 37).
Identified variants were classified according to the standards and guidelines by the American College of Medical Genetics and Genomics and the Association for Molecular Pathology (Richards et al., 2015).
Novel variant not reported previously.