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. 2020 Jul 1;8(9):e1376. doi: 10.1002/mgg3.1376

Table 2.

Clinical characteristics and detected variants of the patients with presumed disease‐causing variants (n = 40)

Patient Sex Onset age Diagnosis age Electroclinical syndrome Type of seizures Variant FHx of seizure DD/ID Febrile seizure
Gene Inherit Refseq a c.DNA Amino acid ACMG b
E‐001 F 4 m 2 y 10 m Dravet syndrome

FT

GT

PCDH19 XL NM_001184880.1 c.370G>T c p.(Asp124Tyr) LP Mother Mild Yes
E‐002 F 4 m 2 y 9 m Dravet syndrome

FIA

FHC

GAA

SCN1A AD NM_001165963.2 c.5596del c p.(Asp1866fIlesTer11) P None Severe Yes
E‐010 F 6 m 7 y Dravet syndrome

FHC

GAA

SCN1A AD NM_001165963.2 c.602+1G>C c NA LP None Severe Yes
E‐037 M 5 m 9 y 9 m Dravet syndrome

GM

GMA

FHC

SCN1A AD NM_001165963.2 c.1088C>G p.(Thr363Arg) P None Severe Yes
E‐039 F 11 m 9 y 8 m Dravet syndrome

GTC

FTC

PCDH19 XL NM_001184880.1 c.1998del p.(Asp667MetfsTer9) LP None Mild Yes
E‐044 M 5 m 12 y 7 m Dravet syndrome

GTC

FHC

FIA

SCN1A AD NM_001165963.2 c.580G>A p.(Asp194Asn) LP None Severe Yes
E‐051‐P M 4 m 1 y 2 m BFIE

FIA

GTC

PRRT2 AD NM_145239.2 c.971del p.(Gly324GlufsTer13) P Sibling Normal None
E‐051‐S F 4 m 7 y 3 m BFIE

FIA

GTC

PRRT2 AD NM_145239.2 c.971del p.(Gly324GlufsTer13) P Sibling Normal None
E‐076 M 6 m 16 y 4 m Dravet syndrome

GTC

FHK

FIA

SCN1A AD NM_001165963.2 c.1178G>A p.(Arg393His) P None Severe Yes
E‐079 M 3 d 2 y 9 m BFNS GT KCNQ2 AD NM_172107.3 c.1771C>T c p.(Gln591Ter) P Sibling Normal None
E‐092 F 6 m 11 y 4 m Dravet syndrome

GT

FIA

FM w V

SCN1A AD NM_001165963.2 c.2589+3A>T NA P None Severe Yes
E‐100 M 2 d 9 y 3 m Dravet syndrome

FHC

FHK

GT

SCN1A AD NM_001165963.2 c.4723C>T p.(Arg1575Cys) LP None Severe Yes
E‐103 F 6 m 6 y 2 m Dravet syndrome

FHC

GM

GTC

SCN1A AD NM_001165963.2 c.264+5G>C NA LP Aunt Severe Yes
E‐104 M 5 m 8 y 11 m Dravet syndrome

FHC

FM w V

GTC

SCN1A AD NM_001165963.2 c.4242C>G c p.(Asn414Lys) LP None Severe Yes
E‐121 M 3 m 20 y Dravet syndrome

GM

GT

SCN1A AD NM_001165963.2 c.846del c p.(Thr283ProfsTer10) LP None Severe Yes
E‐122 M 4 m 10 y 3 m EOEE

IS

FM

GT

ARX XLR NM_139058.2 c.1146G>C c p.(Lys382Asn) LP Cousin Severe None
E‐129 M 3 m 17 y 6 m Dravet syndrome

GT

GM

FHC

SCN1A AD NM_001165963.2 c.2589+3A>T NA LP None Severe Yes
E‐142 F 6 m 11 m Dravet syndrome

GTC

FIA

SCN1A AD NM_001165963.2 c.235G>A p.(Asp79Asn) LP Cousin Moderate Yes
E‐147 F 1 m 10 y EOEE

IS

GM

FC

STXBP1 AD NM_003165.3 c.994_1003del c p.(Lys332LeufsTer21) P None Severe None
E‐153 F 5 m 8 y 4 m Dravet syndrome

FHC

FIA

GTC

SCN1A AD NM_001165963.2 c.2415+5G>A NA LP None Severe Yes
E‐155 M 5 m 7 m BFIE

FIA

FHC

PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P None Normal None
E‐170 F 4 m 5 m EOEE GT KCNQ2 AD NM_172109.3 c.773A>G p.(Asn258Ser) LP None Moderate None
E‐180 F 6 m 8 y 5 m Dravet syndrome

GT

FHC

SCN1A AD NM_001165963.2 c.2792G>A p.(Arg931His) LP Aunt Severe Yes
E‐199 M 6 m 10 y BFIE/PKD

FIA

GT

PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P None Normal None
E‐200 F 6 m 10 m BFIE GT PRRT2 AD NM_145239.2 c.650del p.(Arg217GlnfsTer12) P None Normal None
E‐204 M 9 m 1 y 10 m EOEE

GA

GTC

SCN8A AD NM_014191.3 c.778T>G c p.(Phe260Val) LP None Severe None
E‐214 M 10 m 12 y 4 m EOEE

GM

GT

FIA

ARX XLR NM_139058.2 c.1135C>T c p.(Arg379Cys) LP Father Severe None
E‐218 M 4 m 5 m BFIE GTC PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P Sibling Normal None
E‐220‐P F 3 m 5 m BFIE

GTC

FC

PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P Sibling Normal None
E‐220‐S1 F 3 m 6 y 4 m BFIE GT PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P Sibling Normal None
E‐221 M 6 m 18 y 7 m Dravet syndrome

FHC

GTC

FIA

SCN1A AD NM_001165963.2 c.5341T>G p.(Tyr1781Asp) LP Cousin Severe Yes
E‐230 M 12 m 3 y 7 m GEFSP GT SCN1A AD NM_001165963.2 c.5671G>T c p.(Glu1891Ter) P None Normal Yes
E‐234 F 4 m 3 y Unclassified

GT

FHC

DEPDC5 AD NM_001242896.1 c.3802C>T p.(Arg1268Ter) LP None Normal Yes
E‐244 M 5 d 3 m BFNS

FHC

GT

SCN2A AD NM_021007.2 c.4712T>C p.(Ile1571Thr) LP None Normal None
E‐251 F 4 m 1 y BFIE

FIA

GT

PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P Aunt Normal None
E‐258‐P M 2 m 6 m EOEE

FIA

IS

ARX XLR NM_139058.2 c.1146G>C c p.(Lys382Asn) LP Cousin Severe None
E‐283 M 4 m 5 m BFIE GT PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P

Mother

Cousin

Normal None
E‐294 M 4 m 4 m BFIE

FHC

GTC

PRRT2 AD NM_145239.2 c.649dupC p.(Arg217ProfsTer8) P Sibling Normal None
E‐391 M 2 d 2 m EOEE

FIA

GT

SCN2A AD NM_021007.2 c.5645G>A p.(Arg1882Gln) P None Severe None
E‐392 M 1 d 1 m EOEE

GT

FT

SCN2A AD NM_021007.2 c.4609A>T p.(Ile537Phe) LP None Severe None

Abbreviations: AD, autosomal dominant; BFIE, benign familial infantile epilepsy; BFNS, benign familial neonatal seizure; d, days; DD, developmental delay; EOEE, early‐onset epileptic encephalopathy; FHC, focal hemiclonic; FHK, focal hyperkinetic; FHx, family history; FIA, focal impaired awareness; FM w V, focal motor with version; FM, focal motor; FT, focal tonic; GAA, generalized atypical absence; GEFSP, generalized epilepsy with febrile seizure plus; GM, generalized myoclonic; GMA, generalized myoclonic absence; GT, generalized tonic; GTC, generalized tonic clonic; ID, intellectual disability; IS, infantile spasms; LP, likely pathogenic; m, months; NA, not available; P, pathogenic; PKD, paroxysmal kinesigenic dyskinesia; XL, X‐linked; XLR, X‐linked recessive; y, year.

a

The sequencing reads were aligned to the human genome reference (GRCh37: Genome Reference Consortium human build 37).

b

Identified variants were classified according to the standards and guidelines by the American College of Medical Genetics and Genomics and the Association for Molecular Pathology (Richards et al., 2015).

c

Novel variant not reported previously.