Table 2.
Polymorphism information of 30 EST-SSR markers in 192 individuals. Number of alleles (NA); number of effective alleles (NE); Shannon’s information index (I); observed heterozygosity (HO); expected heterozygosity (HE); and polymorphism information content (PIC); untranslated region (UTR); coding sequence (CDS). All 30 polymorphic markers were at Hardy-Weinberg equilibrium (significance is P ≤ 0.01)
| Primer name | SSR position | NA | NE | I | HO | HE | PIC |
|---|---|---|---|---|---|---|---|
| SO060 | CDS | 14 | 4.34 | 1.81 | 0.65 | 0.77 | 0.74 |
| SO095 | UTR | 8 | 2.41 | 1.13 | 0.56 | 0.59 | 0.52 |
| SO139 | CDS | 4 | 2.30 | 0.92 | 0.53 | 0.57 | 0.47 |
| SO208 | UTR | 10 | 3.54 | 1.66 | 0.63 | 0.72 | 0.69 |
| SO212 | UTR | 9 | 2.07 | 1.07 | 0.45 | 0.52 | 0.48 |
| SO284 | UTR | 9 | 1.63 | 0.85 | 0.41 | 0.39 | 0.36 |
| SO296 | CDS | 9 | 3.39 | 1.55 | 0.66 | 0.71 | 0.67 |
| SO310 | UTR | 7 | 1.34 | 0.59 | 0.21 | 0.26 | 0.24 |
| SO328 | UTR | 14 | 4.78 | 1.82 | 0.60 | 0.79 | 0.76 |
| SO336 | UTR | 8 | 3.92 | 1.57 | 0.80 | 0.75 | 0.71 |
| SO364 | CDS | 5 | 1.80 | 0.84 | 0.44 | 0.44 | 0.40 |
| SO376 | UTR | 8 | 3.96 | 1.54 | 0.69 | 0.75 | 0.71 |
| SO381 | UTR | 4 | 2.47 | 0.99 | 0.55 | 0.60 | 0.51 |
| SO387 | UTR | 3 | 1.39 | 0.53 | 0.27 | 0.28 | 0.26 |
| SO413 | UTR | 10 | 2.35 | 1.12 | 0.53 | 0.58 | 0.52 |
| SO415 | CDS | 5 | 2.12 | 0.92 | 0.54 | 0.53 | 0.45 |
| SO469 | UTR | 9 | 3.41 | 1.40 | 0.57 | 0.71 | 0.66 |
| SO504 | UTR | 4 | 2.13 | 0.90 | 0.54 | 0.53 | 0.45 |
| SO508 | UTR | 16 | 7.06 | 2.23 | 0.87 | 0.86 | 0.84 |
| SO525 | CDS | 16 | 8.78 | 2.33 | 0.69 | 0.89 | 0.88 |
| SO528 | UTR | 5 | 1.37 | 0.53 | 0.31 | 0.27 | 0.25 |
| SO540 | CDS | 5 | 1.52 | 0.60 | 0.42 | 0.34 | 0.30 |
| SO557 | CDS | 13 | 4.82 | 1.86 | 0.80 | 0.79 | 0.77 |
| SO649 | CDS | 6 | 2.49 | 1.05 | 0.54 | 0.60 | 0.52 |
| SO696 | UTR | 3 | 1.52 | 0.54 | 0.30 | 0.34 | 0.29 |
| SO711 | CDS | 6 | 1.33 | 0.53 | 0.28 | 0.25 | 0.23 |
| SO783 | UTR | 10 | 3.17 | 1.4 | 0.57 | 0.69 | 0.63 |
| SO813 | CDS | 5 | 1.86 | 0.91 | 0.40 | 0.46 | 0.42 |
| SO833 | CDS | 6 | 1.41 | 0.61 | 0.26 | 0.29 | 0.27 |
| SO889 | UTR | 3 | 1.94 | 0.69 | 0.45 | 0.48 | 0.37 |
| Mean | 7.8 | 2.89 | 1.15 | 0.52 | 0.56 | 0.51 |