Antibodies |
Mouse anti-GFP |
Clontech |
Cat#632381, RRID:AB_2313808 |
Rabbit anti-hexokinase antibody |
Rockland |
Cat#100–4159, RRID:AB_21991 |
Anti-mouse 800 secondary |
LI-COR |
Cat#926–32210, RRID:AB_621842 |
Anti-rabbit 680 secondary |
LI-COR |
Cat#926–68071, RRID:AB_10956166 |
Rat anti-tubulin |
Serotec |
Cat#MCA78G, RRID:AB_325005 |
Anti-rat 680 secondary |
LI-COR |
Cat#926–68076, RRID:AB_10956590 |
Chemicals, Peptides, and Recombinant Proteins |
Lactimidomycin (LTM) |
Millipore |
Cat#506291 |
RNaseI |
Ambion |
Cat#AM2294 |
Sequencing grade modified trypsin |
Promega |
Cat#V5111 |
PMSF |
Sigma |
Cat#78830 |
cOmplete mini EDTA-free protease inhibitor cocktail |
Roche |
Cat#29384100 |
Acid-washed glass beads |
Sigma |
Cat#G8772 |
PBS Odyssey Blocking Buffer |
LI-COR |
Cat#927–40100 |
Superscript III |
Thermo |
Cat#18080044 |
SYBR green mix |
Thermo |
Cat#4309155 |
Critical Commercial Assays |
Q5 Site Directed Mutagenesis kit |
NEB |
Cat#E0554S |
TURBO DNA-free kit |
Ambion |
Cat#AM1907 |
Deposited Data |
Raw and analyzed sequencing data |
This study |
GEO: GSE150375
|
Experimental Models: Organisms/Strains |
All yeast strains are described in Table S5. |
Brar-Ünal Lab and this study |
N/A |
Oligonucleotides |
oGAB-2736 GFP-qPCR_f ctccggtgaaggtgaaggtg |
IDT |
N/A |
oGAB-2737 GFP-qPCR_r aggttggccatggaactgg |
IDT |
N/A |
oGAB-3301 PFY1-qPCR_f acggtagacatgatgctgagg |
IDT |
N/A |
oGAB-3302 PFY1-qPCR_r acggttggtggataatgagc |
IDT |
N/A |
oGAB-7864 HYP2-qPCR_f TGTCAAGGCTCCAGAAGGTGA |
IDT |
N/A |
oGAB-7865 HYP2-qPCR_r CCCATAGCGGAGATGATGGT |
IDT |
N/A |
Recombinant DNA |
pÜB1/pFA6A-KanMX |
Addgene |
Cat#39296 |
pÜB189/pFA6A-KanMX-pCUP1 (derived from pFA6A) |
Brar-Ünal Lab |
N/A |
pÜB731 (derived from pNH604) |
Brar-Ünal Lab |
N/A |
Software and Algorithms |
Bowtie2 |
Langmead and Salzberg, 2012 |
http://bowtie-bio.sourceforge.net/bowtie2/index.shtml |
MochiView |
Homann and Johnson, 2010 |
http://www.johnsonlab.ucsf.edu/mochi/ |
ImageStudio Lite Software |
LI-COR |
https://www.licor.com/bio/products/software/image_studio_lite/index.html |