Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2020 Jul 31;27(3):dsaa016. doi: 10.1093/dnares/dsaa016

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2020. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 4. — Orthologous gene clusters in the terpenoid biosynthetic pathway. The number of corresponding orthologs from each species is indicated by colour gradient intensity. (A) Orthogroups occupied by Arabidopsis thaliana genes involved in the mevalonic acid (MVA) and methylerythriol phosphate (MEP) pathways. MVA pathway leading to sterols and sesquiterpenes: acetyl-CoA acetyltransferase activity (AACT); 3-hydroxy-3-methylglutaryl coenzyme A synthase (HMGS); hydroxymethylglutaryl-CoA reductase (HMGR); ATP: mevalonate phosphotransferase (MK); phosphomevalonate kinase (PMK); mevalonate diphosphate decarboxylase (MDD); isopentenyl diphosphate delta-isomerase (IDI); geranyltranstransferase (FPPS). MEP pathway leading to geraniol, monoterpenes, and diterpenes: 1-deoxy-D-xylulose-5-phosphate synthase (DXS); 1-deoxy-d-xylulose-5-phosphate reductoisomerase (DXR); 2-C-methyl-d-erythritol 4-phosphate cytidylyltransferase (MCT); 4-(cytidine 50-diphospho)-2-C-methyl-d-erythritol kinase (CMK); 2-C-methyl-d-erythritol 2,4-cyclodiphosphate synthase (MDS); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (HDS); 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (HDR); geranylgeranyl pyrophosphate synthase large subunit (GGPPS-LSU); geranyl pyrophosphate synthase small subunit (GPPS-SSU). Terpene synthase subfamilies: TPS a, b, c, g, e/f. (B) Orthogroups occupied by A. thaliana and Lamiaceae terpene synthase genes. Orthologous groups specific to A. thaliana are shown to the right of the red divider line; singletons are denoted by an ‘*’ following the gene ID.