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. 2020 Oct;26(10):2522–2524. doi: 10.3201/eid2610.191485

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Phylogenetic tree (all-shared proteins) of Streptococcus equi subspecies zooepidemicus whole-genome sequences obtained from outbreak in pigs from Canada (blue blocks, PRJNA578379), compared with previously characterized genome sequences from GenBank (n = 28). Tree inferred using BLAST (https://blast.ncbi.nlm.nih.gov), followed by FastTree within the PATRIC package (5). Support values shown indicate the number of times a particular branch was observed in the support trees using gene-wise jackknifing. Shaded colors reflect similar host taxonomy associated with a branch (>3 isolates).