Deposited Data |
Datasets |
This paper |
https://doi.org/10.17605/OSF.IO/PM89Y |
Experimental Models: Organisms/Strains |
Rat: Long-Evans |
Harlan Industries |
|
Software and Algorithms |
Data Acquisition Software |
Cheetah (Neuralynx) |
https://neuralynx.com |
Analysis Software |
MATLAB v2017, 2018, 2019 |
https://www.mathworks.com/ |
Analysis Software |
RStudio |
https://rstudio.com/ |
Custom Code for Data Analysis |
This paper |
https://github.com/ryanharvey1/ephys_tools |
Pass Index |
[109] |
https://github.com/jrclimer/Pass_Index |
Theta-rhythmicity |
[67] |
https://github.com/jrclimer/mle_rhythmicity |
Circular Statistics Toolbox |
[110] |
https://www.mathworks.com/matlabcentral/fileexchange/10676-circular-statistics-toolbox-directional-statistics |
Spike Sorting |
Klustakwik |
http://klustakwik.sourceforge.net/ |
Spike Sorting |
Kilosort2 |
https://github.com/MouseLand/Kilosort2 |
Spike sorting |
MClust |
https://github.com/adredish/MClust-Spike-Sorting-Toolbox |
Spike sorting |
Phy |
https://github.com/cortex-lab/phy |
Other |
Custom electrodes (8 tetrodes) |
Custom built |
|
Halo-18 Microdrive (16 tetrodes) |
Neuralynx |
https://neuralynx.com/hardware/halo-18-microdrive |
Digital Neuralynx recording system, Lynx SX |
Neuralynx |
https://neuralynx.com |
17um dia nichrome wire |
California fine wire |
https://www.calfinewire.com/index.html |