Table 4.
Recombination breakpoints identified in GXYL1403, GXNN1839, and associated parental strains of PRRSV.
| Isolate | Breakpoints | Major parent | Minor parent | p-Value of the detection methods | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Beginning | Ending | RDP | GENECONV | BootScan | MaxChi | Chimera | SiScan | 3Seq | |||
| GXNN1839 | 7,872 | 8,162 | NADC30 | VR-2332 | 3.373 × 10−11 | 3.971 × 10−13 | 2.189 × 10−17 | 1.190 × 10−14 | 2.497 × 10−15 | 3.534 × 10−16 | 1.545 × 10−14 |
| 12,587 | 13,282 | NADC30 | VR-2332 | 5.253 × 10−26 | 6.773 × 10−21 | 1.725 × 10−21 | 1.316 × 10−11 | 1.655 × 10−12 | 2.546 × 10−18 | 2.22 × 10−15 | |
| GXYL1403 | 8,961 | 11,181 | JXA1 | CH-1a | 3.408 × 10−18 | 6.05 × 10−23 | 2.648 × 10−16 | 1.146 × 10−24 | 2.228 × 10−17 | 3.782 × 10−14 | 1.515 × 10−17 |