TABLE 2.
The validation of molecular docking algorithm (RMSD).
Protein | CDOCKER RMSD (Å) | LibDock RMSD (Å) |
(Fibronectin) 2CG6 | 1.591 | * |
(P21) 2ZVW | 0.977 | * |
(Bcl-2) 4IEH | 2.001 | 6.850 |
(AKT) 3D0E | 0.939 | 2.608 |
(JNK) 4Y46 | 1.156 | 4.695 |
(P38) 2YIX | 0.646 | 1.986 |
(VEGF) 5HHC | 1.786 | * |
*In LibDock module, both Tan IIA and Cisplatin cannot dock with the targeted protein.