Table 4.

Expression changes in the 14 miRNAs that were predicted to target IRF3.

miRNAsa	1 dpcb	7 dpcb	20 dpc-SSc	20 dpc-RRc
ssa-miR-10d-5p	0.7	−1.2	−1.4	−1.0
ssa-miR-10b-5p	0.7	−1.2	−1.4	−1.0
ssa-miR-30c-d-1-3p	0.7	−1.1	−1.2	−1.0
ssa-miR-30d-2-3p	0.7	−1.1	−1.2	−1.0
ssa-miR-21a-2-3p	0.4	−1.9	−1.4	−1.8
ssa-miR-21b-3p	0.4	−0.7	1.1	−0.6
ssa-miR-18b-3p	0.1	−0.1	1.0	−0.4
ssa-miR-novel-5-3p	0.5	−0.2	2.2	−0.5
ssa-miR-29b-3-5p	0.9	−0.2	0.6	−0.4
ssa-miR-29b-3p	−0.1	0.6	1.5	0.6
ssa-miR-29a-3p	−0.1	0.2	1.7	0.5
ssa-miR-29c-3p	0.2	0.4	2.3	0.6
ssa-miR-29de-3p	−0.4	0.5	2.5	0.7
ssa-miR-8159-5p	0.0	0.3	−1.9	0.2

^aMature Atlantic salmon miRNA names as annotated in Woldemariam et al. (33).

^blog2 fold change from DESeq2 analysis of IPNV challenged samples vs. controls at 1 and 7 dpc, respectively.

^clog2 fold change from DESeq2 analysis of IPNV challenged SS groups vs. controls and RR groups vs. controls at 20 dpc, respectively.