Table 1.
Study (PMID) | Bioproject | Number of samples | Age (days) (mean ± st.dev) | Age (months) (mean ± st.dev) | Nation | Settlement | Socioeconomic status | Technology | Primer region |
---|---|---|---|---|---|---|---|---|---|
24896187 | PRJEB5482 | 190 | 258 ± 233 | 8 ± 8 | Bangladesh | Urban slum | low socioeconomic status | Illumina MiSeq | V1-V2 |
27160322 | PRJNA318053 | 15 | 442 ± 262 | 15 ± 9 | Ireland | Urban area | – | Illumina_MiSeq | V4–V5 |
27306664 | PRJEB14529 | 225 | 246 ± 207 | 8 ± 7 | USA | Urban area | – | Illumina MiSeq | V4 |
27717398 | PRJNA331150 | 50 | 322 ± 104 | 11 ± 3 | USA | Urban area | – | Illumina MiSeq | V4 |
28079170 | PRJEB15633 | 18 | 115 ± 34 | 4 ± 1 | Gambia | Urban area | – | Illumina_MiSeq | V4 |
28095889 | PRJNA339264 | 167 | 8 ± 38 | 0 ± 0 | Ireland | Urban area | – | Illumina MiSeq | V4–V5 |
28733284 | PRJNA377056 | 9 | 383 ± 3 | 12 ± 0 | Italy | Urban area | middle socioeconomic status | Illumina_MiSeq | V3-V4 |
28789705 | PRJNA362530 | 10 | 28 ± 6 | 1 ± 0 | Spain | Urban area | – | Illumina_MiSeq | V3 |
28877893 | PRJEB21196 | 64 | 118 ± 51 | 4 ± 2 | Germany | Urban area | – | Illumina_MiSeq | V3-V4 |
29184093 | PRJNA403824 | 47 | 25 ± 31 | 1 ± 1 | Canada | Urban area | – | Illumina MiSeq | V3 |
29217369 | PRJEB21946 | 44 | 70 ± 0 | 2 ± 0 | India | Densely populated Urban area | – | Illumina MiSeq | V4 |
29795809 | PRJEB11419 | 127 | 646 ± 266 | 22 ± 9 | USA Thailand United Kingdom Australia Ireland Norway Slovakia Canada |
Urban area | – | Illumina MiSeq | V4 |
29884786 | PRJNA450946 PRJNA450998 PRJNA451090 PRJNA451108 PRJNA451156 PRJNA451314 PRJNA451320 PRJNA451359 PRJNA451398 PRJNA451432 PRJNA453125 PRJNA451346 |
24 | 186 ± 182 | 6 ± 6 | Norway | Urban area | – | Illumina HiSeq 2500 | V4 |
30131575 | PRJNA350676 | 20 | 387 ± 0 | 13 ± 0 | Italy | Urban area | – | Illumina MiSeq | V3-V4 |
30579350 | PRJNA491825 | 25 | 806 ± 215 | 27 ± 7 | Denmark | Urban area | – | Illumina MiSeq | V3-V4 |