| 4PBik | Fourth-Order Poisson-Bikerman |
| BD | Brownian Dynamics |
| bi-CG | bi-Conjugate Gradient Stabilized |
| DH | Debye-Hückel |
| EDL | Electric Double-Layer |
| FD | Finite Difference |
| GA | Gramicidin A |
| JESS | Joint Expert Speciation System |
| L-J | Lennard–Jones |
| MC | Monte Carlo |
| MD | Molecular Dynamics |
| NCX | Sodium Calcium Exchanger |
| NP | Nernst-Planck |
| ODE | Ordinary Differential Equation |
| OZ | Ornstein-Zernike |
| PB | Poisson–Boltzmann |
| PDE | Partial Differential Equation |
| PDB | Protein Data Bank |
| PNP | Poisson-Nernst-Planck |
| PNPB | Poisson-Nernst-Planck-Bikerman |
| SG | Scharfetter-Gummel |
| TPS | Total Potential State |