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. 2019 Jul 6;11(4):185–205. doi: 10.1080/21645698.2019.1631115

TABLE 3.

List of some web-based tools to design CRISPR/Cas systems.

Tool Features Web address Reference
CRISPR Design sgRNA designing, prediction of off-site targeting against a limited number of reference genomes including Arabidopsis thaliana, http://crispr.mit.edu 70
Cas-OFFinder Multi-featured, prediction of potential off-site targeting against many reference genomes, sgRNA designing, PAM type option for different CRISPR/Cas variants http://www.rgenome.net/cas-offinder/ 71
CCTop sgRNA target selection, off-target prediction http://crispr.cos.uni-heidelberg.de/ 72
CHOPCHOP Multi-featured, Target sites for CRISPR/TALENs systems, Off-site targeting against many reference genomes http://chopchop.cbu.uib.no 73
E-CRISP Multi-featured, Designing of CRISPR constructs, Prediction of off-site targeting against a limited number of genomes http://www.e-crisp.org/E-CRISP/reannotate_crispr.html 74
CROP-IT CRISPR/Cas9 target sites in the input sequence, prediction of off-site targeting http://www.adlilab.org/CROP-IT/homepage.html 75
CRISPR-P sgRNA designing in plants, prediction of off-site targeting http://cbi.hzau.edu.cn/crispr/ 76
CRISPRseek Target-specific sgRNA design tool, Prediction of off-site targeting http://bioconductor.org/packages/release/bioc/html/CRISPRseek.html 77
CRISPR-PLANT CRISPR/Cas9-sgRNAs designing tool limited to plants http://genome.arizona.edu/crispr/ 78
SYNTHEGO-tool Multi-featured, Design and validate CRISPR sgRNAs, Prediction of off-site targeting https://design.synthego.com/#/