Table 3.
Diversity indices for 24 microsatellite markers
SSR locus | NA | NDA | I | HO | HE | PIC |
---|---|---|---|---|---|---|
Br0012 | 9 | 9 | 0.86 | 0.50 | 0.35 | 0.85 |
Br0029 | 11 | 10 | 0.73 | 0.42 | 0.26 | 0.71 |
Br0031 | 9 | 9 | 0.67 | 0.50 | 0.36 | 0.66 |
Br0067 | 5 | 5 | 0.84 | 0.17 | 0.11 | 0.82 |
Br0076 | 9 | 9 | 0.81 | 0.50 | 0.33 | 0.80 |
Br0087 | 22 | 16 | 0.75 | 0.43 | 0.31 | 0.74 |
Br0092 | 7 | 7 | 0.76 | 0.50 | 0.30 | 0.74 |
Br0115 | 16 | 12 | 0.95 | 0.66 | 0.44 | 0.95 |
Br0117 | 8 | 8 | 0.74 | 0.50 | 0.31 | 0.73 |
Br0118 | 12 | 11 | 0.70 | 0.42 | 0.24 | 0.68 |
Br0212 | 17 | 13 | 0.95 | 0.57 | 0.44 | 0.95 |
Br0214 | 16 | 12 | 0.93 | 0.88 | 0.66 | 0.92 |
Br0235 | 31 | 23 | 0.95 | 0.71 | 0.55 | 0.95 |
Br3002 | 11 | 9 | 0.87 | 0.63 | 0.46 | 0.86 |
Br0028 | 40 | 19 | 0.79 | 0.65 | 0.48 | 0.78 |
Br0100 | 13 | 13 | 0.73 | 0.63 | 0.44 | 0.72 |
Br0122 | 10 | 9 | 0.78 | 0.42 | 0.26 | 0.76 |
Br0130 | 18 | 11 | 0.76 | 0.67 | 0.47 | 0.75 |
Br0149 | 13 | 12 | 0.67 | 0.50 | 0.32 | 0.66 |
Br0152 | 29 | 19 | 0.73 | 0.69 | 0.43 | 0.73 |
Br0156 | 38 | 22 | 0.85 | 0.74 | 0.55 | 0.85 |
Br0203 | 22 | 15 | 0.80 | 0.56 | 0.36 | 0.79 |
Br0213 | 6 | 6 | 0.66 | 0.50 | 0.32 | 0.64 |
Br3009 | 35 | 23 | 0.81 | 0.70 | 0.49 | 0.80 |
Mean | 16.96 ± 10.43 | 12.74 ± 5.32 | 0.80 ± 0.09 | 0.56 ± 0.15 | 0.38 ± 0.12 | 0.79 ± 0.09 |
NA number of alleles, NDA number of different alleles, I Shannon index, HO observed heterozygosity, HE expected heterozygosity