Skip to main content
. 2020 Sep 24;8:e10008. doi: 10.7717/peerj.10008

Table 6. The SIZE, ES, NES. NOM p-val, and FDR q-val of the KEGG enrichment pathways.

SIZE ES NES NOM P FDR q-valve
Low risk group enrich pathways
KEGG_ASTHMA 28 −0.802 −2.039 <0.01 0.040
KEGG_ARACHIDONIC_ACID_METABOLISM 58 −0.558 −1.956 0.002 0.057
KEGG_GLYCEROPHOSPHOLIPID_METABOLISM 77 −0.435 −1.739 0.008 0.117
KEGG_ALDOSTERONE_REGULATED_SODIUM_ REABSORPTION 42 −0.494 −1.702 0.010 0.135
KEGG_ALPHA_LINOLENIC_ACID_METABOLISM 19 −0.568 −1.672 0.019 0.136
KEGG_FATTY_ACID_METABOLISM 42 −0.517 −1.635 0.048 0.138
High risk group enrich pathways
KEGG_CELL_CYCLE 124 0.746 2.384 <0.01 0.001
KEGG_PYRIMIDINE_METABOLISM 98 0.620 2.160 <0.01 0.008
KEGG_MISMATCH_REPAIR 23 0.852 2.149 <0.01 0.005
KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 134 0.541 2.144 <0.01 0.004
KEGG_P53_SIGNALING_PATHWAY 68 0.546 2.100 0.002 0.006

Notes.

ES
enrichment score
NES
normalized enrichment score
NOM P
nominal p value
FDR q-valve
false discovery rate