TABLE 2.
Predicted MHC class I and II epitopes of the designed virus-like particle (VLP)-based vaccine.
HLA sets in HBV | MHC | Allele | Position | Sequence | Percentile rank* |
Common | MHC I | HLA-A*02:01 | 18–27, 253–262 | FLPSDFFPSV | 0.11 |
MHC II | HLA-DRB1*01:01 | 163–177, 382–396 | ETVLEYLVSFGVWIR | 4.4 | |
Non-responder | MHC I | HLA-B*08:01 | 214–222, 222–230, 431–444, 441–449 | SPRRRRSQS | 0.3 |
207–215, 426–434 | SPRRRTPSP | 0.2 | |||
150–158, 369–377 | LLWFHISCL | 0.5 | |||
142–150, 361–369 | NMGLKIRQL | 1 | |||
MHC II | HLA-DRB1*03:01 | 20–34, 255–269 | PSDFFPSVRDLLDTA | 7.1 | |
HLA-DRB1*07:01 | 162–176, 381–395 | RETVLEYLVSFGVWI | 2.8 | ||
144–158, 363–377 | GLKIRQLLWFHISCL | 7 | |||
HLA-DQB1*02:01 | 11–25, 246–260 | ATVELLSFLPSDFFP | 0.77 | ||
5–19, 240–254 | PYKEFGATVELLSFL | 0.92 | |||
13–27, 248–262 | VELLSFLPSDFFPSV | 0.94 | |||
10–24, 245–259 | GATVELLSFLPSDFF | 0.97 | |||
Positive responsive | MHC II | HLA-DRB1*13:01 | 163–177, 382–396 | ETVLEYLVSFGVWIR | 0.53 |
169–183, 388–402 | LVSFGVWIRTPPAYR | 0.53 | |||
HLA-DRB1*15:01 | 163–177, 382–396 | ETVLEYLVSFGVWIR | 0.84 | ||
HLA-DRB1*04:01 | 132–146, 351–365 | RDLVVNYVNTNMGLK | 2.5 |
*Percentile rank ≤1: high-affinity peptide sequences with the antigenic property; percentile rank ≤10: intermediate-affinity peptide sequences with the antigenic property.