Table 1. Different CNV patterns found in lung cancer samples (n = 1017).
gene | Diploid | Deep deletion | Shallow deletion | Copy number gain | Amplification | CNV sum | Percentage | |
Eraser | ALKBH5 | 361 | 9 | 510 | 131 | 6 | 656 | 64.50% |
FTO | 487 | 7 | 324 | 193 | 6 | 530 | 52.11% | |
Writer | METTL14 | 469 | 0 | 473 | 75 | 0 | 548 | 53.88% |
METTL3 | 431 | 4 | 270 | 296 | 16 | 586 | 57.62% | |
WTAP | 488 | 8 | 382 | 138 | 1 | 529 | 52.02% | |
Reader | YTHDF1 | 420 | 1 | 106 | 458 | 32 | 597 | 58.70% |
YTHDF2 | 512 | 4 | 332 | 166 | 3 | 505 | 49.66% | |
YTHDC1 | 493 | 2 | 374 | 124 | 24 | 524 | 51.52% | |
YTHDC2 | 320 | 8 | 585 | 102 | 2 | 697 | 68.53% | |
YTHDF3 | 391 | 3 | 117 | 474 | 32 | 626 | 61.55% | |
Hot gene | EGFR | 398 | 6 | 85 | 465 | 63 | 619 | 60.87% |
ERBB2 | 473 | 1 | 148 | 370 | 25 | 544 | 53.49% | |
ALK | 558 | 5 | 46 | 397 | 11 | 459 | 45.13% | |
KRAS | 465 | 2 | 128 | 366 | 56 | 552 | 54.28% | |
MET | 442 | 5 | 130 | 416 | 24 | 575 | 56.54% | |
TP53 | 344 | 10 | 577 | 85 | 1 | 673 | 66.18% |