Table 1.

Overview of sequencing data information

Group	Raw reads	Clean reads	rRNA trimmed	Mapping reads
0 h	32,355,870	29,757,717	29,706,403	28,803,947
EV-A71-6h	31,914,208	28,895,872	28,833,270	27,439,676
EV-A71-12h	41,780,160	37,000,177	36,918,228	34,682,529
EV-A71-24h	30,695,202	27,546,778	27,484,897	26,206,126
CV-A16-6h	34,101,512	30,206,999	30,142,248	26,206,126
CV-A16-12h	31,542,638	28,262,661	28,191,333	28,713,177
CV-A16-24h	31,296,916	27,918,538	27,828,716	26,636,815