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. 2020 Sep 29;21:424. doi: 10.1186/s12859-020-03711-2

Table 2.

Comparison of run times of FFVA and VFFVA in small models in seconds. The results are presented as the mean and standard deviation of five runs

Model FFVA mean(std) loading and analysis time VFFVA mean(std) loading and analysis time FFVA mean(std) analysis only
2 cores
Ecoli_core 19.5(0.5) 0.2(0.01) 0.37(0.1)
P_putida 19.2(0.7) 0.6(0.02) 0.81(0.09)
EcoliK12 20.4(0.6) 2.2(0.06) 2.41(0.09)
4 cores
Ecoli_core 19.6(0.6) 0.2(0.005) 0.32(0.01)
P_putida 19.4(1) 0.5(0.02) 0.61(0.01)
EcoliK12 20(0.8) 1.3(0.04) 1.64(0.08)
8 cores
Ecoli_core 19.4(0.5) 0.2(0.03) 0.35(0.05)
P_putida 19.6(0.7) 0.4(0.04) 0.53(0.009)
EcoliK12 20(0.49) 0.9(0.01) 1.22(0.08)
16 cores
Ecoli_core 20.2(0.4) 0.2(0.008) 0.41(0.05)
P_putida 19.5(0.4) 0.4(0.04) 0.51(0.03)
EcoliK12 22(0.7) 0.7(0.01) 0.87(0.03)
32 cores
Ecoli_core 22.2(0.4) 0.3(0.008) 0.6(0.12)
P_putida 21.5(0.6) 0.4(0.01) 0.53(0.004)
EcoliK12 21.5(0.6) 0.6(0.03) 0.78(0.04)