Table 3.
SCFA-related bacterial functions (KEGG IDs) that are significantly different when comparing T3T3 with T1T1 but that are not different when comparing T3T3 with T1T3 or T3T1
| KEGG ID | Function | T3T3 (% ± SD) | T1T1 (% ± SD) | Log2FC (± SE) | p-value | FDR |
|---|---|---|---|---|---|---|
| K00132 | Acetaldehyde dehydrogenase | 3.6E-06 ± 9.7E-06 | 1.2E-05 ± 2.3E-05 | 1.77± 0.46 | 0.0001 | 0.02 |
| K00140 | Malonate or methylmalonate-semialdehyde dehydrogenase | 1.2E-05 ± 2.6E-05 | 2.8E-05 ± 6.1E-05 | 1.86 ± 0.63 | 0.003 | 0.19 |
| K00171 | Pyruvate ferredoxin oxidoreductase δ-subunit | 2.1E-05 ± 3.3E-05 | 6.6E-06 ± 7.2E-06 | −1.92 ± 0.45 | 1.6E-05 | 0.01 |
| K01034 | Butyrate-acetoacetate CoA-transferase | 4.3E-06 ± 1.0E-05 | 2.9E-06 ± 8.5E-05 | −1.98 ± 0.71 | 0.01 | 0.22 |
| K01035 | Butyrate-acetoacetate CoA-transferase | 4.3E-06 ± 1.0E-05 | 2.9E-06 ± 8.5E-05 | −2.45 ± 0.69 | 0.004 | 0.04 |
| K03336 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase | 3.2E-06 ± 9.8E-06 | 1.3E-05 ± 2.4E-05 | 1.93 ± 0.54 | 0.0004 | 0.04 |
| K03337 | 5-deoxy-glucuronate isomerase | 3.2E-06 ± 9.8E-06 | 1.3E-05 ± 2.4E-05 | 1.93 ± 0.54 | 0.0004 | 0.04 |
| K03563 | Carbon storage regulator | 1.2E-04 ± 1.0E-04 | 6.7E-05 ± 6.0E-05 | −0.90 ± 0.34 | 0.01 | 0.29 |
| K04019 | Ethanolamine utilization protein | 7.4E-06 ± 1.2E-05 | 1.8E-05 ± 3.0E-05 | 1.05 ± 0.38 | 0.01 | 0.22 |
| K04844 | Hypothetical glycosyl hydrolase | 2.6E-06 ± 9.9E-06 | 1.1E-05 ± 2.3E-05 | 2.46 ± 0.62 | 0.0001 | 0.02 |
| K05989 | α-L-rhamnosidase | 2.0E-05 ± 1.9E-05 | 3.5E-05 ± 3.9E-05 | 0.84 ± 0.29 | 0.004 | 0.19 |
| K07406 | α-galactosidase | 6.1E-06 ± 1.0E-05 | 2.0E-05 ± 2.8E-05 | 1.76 ± 0.42 | 2.7E-05 | 0.01 |
Percent relative abundance (± SD) for bacterial functions are shown in numerical order based on KEGG IDs with log 2-fold change (Log2FC) ± standard error (SE) values.