Table 1.
The swine core gut microbiome.
| Feature# | Feature ID | Phylum | Order | Family | Genus | Species |
|---|---|---|---|---|---|---|
| F1 | 77560703da191 f21e7d250845229fe06 | Firmicutes | Clostridiales | Veillonellaceae | Megasphaera | |
| F2 | e11db671d9c36b550f08a6ee36ba2cef | Firmicutes | Lactobacillales | Streptococcaceae | Streptococcus | luteciae |
| F3 | 1919b6828724477c2ab08fd9efe3bcd9 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | copri |
| F5 | 002109bc8b4bcf7a97a7794f4cffda2b | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | |
| F6 | 9c4260f79a8007b4d15a1e6fe1129ce1 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | copri |
| F7 | 15caa2d41590f4361bd4ef0b6453fe1 c | Proteobacteria | Enterobacteriales | Enterobacteriaceae | Escherichia | coli |
| F8 | 230f858e6622e1a686ad91373adc20b9 | Firmicutes | Clostridiales | Veillonellaceae | Phascolarctobacterium | |
| F9 | 38ec373490dc98851951b38c50961207 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F10 | 21709f541225b3d1e30e195bced4322b | Bacteroidetes | Bacteroidales | [Paraprevotellaceae] | YRC22 | |
| F12 | 8f194030281f1b235fa5874aa0426bb0 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F13 | 48ea88e5e788894c86b04d558c7ea12d | Firmicutes | Clostridiales | Veillonellaceae | Anaerovibrio | |
| F17 | 7ef3b00cc85b6d0730685b757440e392 | Actinobacteria | Coriobacteriales | Coriobacteriaceae | Collinsella | aerofaciens |
| F20 | 20a99a2686ac6a717b01361cac773046 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | stercorea |
| F21 | f0e22244687ff7f51926d7b54adaec4b | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F23 | 522ba9d695541c9ea478db7cafeb4355 | Bacteroidetes | Bacteroidales | S24-7 | ||
| F28 | fa9cbb7e45355cb861070b68d9a5653b | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F46 | b88939309e235a04fdcff68d166139ab | Bacteroidetes | Bacteroidales | [Paraprevotellaceae] | [Prevotella] | |
| F48 | 27a8a06bc2b03e2ee032a7aeef16dbe3 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | stercorea |
| F50 | 36585850033948d7966edf6717266cc0 | Firmicutes | Clostridiales | [Mogibacteriaceae] | Mogibacterium | |
| F52 | f324a15262fda881e9e0f6b59a20b21d | Bacteroidetes | Bacteroidales | [Paraprevotellaceae] | CF231 | |
| F53 | f2c72e7978ae955c780882f71f689e9b | Firmicutes | Clostridiales | Christensenellaceae | ||
| F62 | 2307b48380cd51b78c43a1da261bdde9 | Bacteroidetes | Bacteroidales | |||
| F63 | fdf37b54fbf9f5a82616d90386ade16d | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F70 | 47ee99688649fa7c2937db076f2039de | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | reuteri |
| F77 | 55d98aa0513d69baf52b439bb4e4207a | Proteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |
| F82 | 1e3a3bda59a3e703d9ebadfb122655d7 | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F86 | 4539eb8d334b124b12ef2f840be6c5d7 | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F87 | fd2a145204502d5d1453ac09704619ad | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F93 | 1f75f87fb55993516a97af66507a0f08 | Bacteroidetes | Bacteroidales | [Paraprevotellaceae] | [Prevotella] | |
| F112 | 04e3a222e2655f35b175436f9cb29844 | Bacteroidetes | Bacteroidales | |||
| F116 | c0e706eff2fbc0db84755141796f11af | Bacteroidetes | Bacteroidales | |||
| F120 | fd4bd6f441389fd712ee14af66eaf217 | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F121 | 52f6ab8a13bead00126a83f61d959ab6 | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | delbrueckii |
| F123 | f212b75172ddc5a1ef357a425ea33482 | Firmicutes | Clostridiales | Christensenellaceae | ||
| F131 | c3a1361961c649a26927a4e6b6eaec04 | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | mucosae |
| F132 | 4b922c405bf97b57647a7f6323092ce1 | Actinobacteria | Coriobacteriales | Coriobacteriaceae | ||
| F136 | d3ea744c5bbb301b99658befe3e1c162 | Firmicutes | Lactobacillales | Lactobacillaceae | Lactobacillus | |
| F144 | 562f555227af77f2f0d0cc3e6462c8d8 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F149 | 795b1744a93f0c030c7cac5ed1573 c20 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F153 | 76f995a642c756e4baef9ba3588be99a | Bacteroidetes | Bacteroidales | Prevotellaceae | Prevotella | |
| F156 | c26fdaf9bfb7235e29a45dad8554c06 c | Bacteroidetes | Bacteroidales | |||
| F157 | f2f55ee5a197eaf6b65a1c22bedc016d | Firmicutes | Erysipelotrichales | Erysipelotrichaceae | [Eubacterium] | biforme |
| F169 | b5dcb92af75a84ef7f76c534e644b4dc | Firmicutes | Clostridiales | Christensenellaceae | ||
| F171 | 6fa1b042db7e367356a0e6b600ce46a0 | Firmicutes | Clostridiales | |||
| F189 | 990ed356cd9dae5b83314355569514e3 | Bacteroidetes | Bacteroidales | |||
| F198 | b05ae994010ddd94626d03a8c4ceafe1 | Firmicutes | Erysipelotrichales | Erysipelotrichaceae | [Eubacterium] | biforme |
| F199 | 179a2e52862950c20141c0e376152624 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F201 | 27e548475cd61c016aaec05c28e95223 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F214 | 5503fc4199485012d18108218ba0c589 | Proteobacteria | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | |
| F215 | deea65343744187b8e911e87975c8979 | Actinobacteria | Coriobacteriales | Coriobacteriaceae | ||
| F229 | fec7ae85682e4fb767970f4dab35bbb5 | Spirochetes | Spirochaetales | Spirochaetaceae | Treponema | |
| F235 | d102b79fac474290436a96751aaccb59 | Proteobacteria | GMD14H09 | |||
| F241 | 3e2fe19948fdefb2fb179e6f8f1def05 | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F271 | 125a703172cdf3ac7155e51b904d6546 | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F275 | 5947530ad170bbc67f9af778d42f8dc7 | Bacteroidetes | Bacteroidales | Porphyromonadaceae | Parabacteroides | |
| F302 | f361d0070bf833c26d64b95fe512847a | Bacteroidetes | Bacteroidales | Prevotellaceae | ||
| F310 | 413d7371b0955033e463b538bfab0cfc | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F312 | 829d3bd6a7df703802fbb4a076f614b5 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F319 | fc3d8267a88365a43202affb1b1c0d1f | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F357 | 71903137448067873e3ffbf70dea44eb | Firmicutes | Clostridiales | |||
| F394 | 1c4985419653025d3a4a1be178f4676 c | Firmicutes | Erysipelotrichales | Erysipelotrichaceae | p-75-a5 | |
| F410 | 6d3a987e101712b3302f6e8e5beee7ea | Firmicutes | Clostridiales | |||
| F413 | 02c93fa4666bd94365b522152d56bb3c | Firmicutes | Clostridiales | Lachnospiraceae | ||
| F491 | ebf50bcde4063f1d5e957907a2879929 | Firmicutes | Clostridiales | |||
| F502 | 0007527ae916772430dd7897aeeeb0e8 | Firmicutes | Clostridiales | Ruminococcaceae | ||
| F518 | 547cc82727e9e688a34afaefcedd5c11 | Proteobacteria | Burkholderiales | Alcaligenaceae | Sutterella | |
| F521 | ba2b96b172b40e9f509571929d9a082b | Actinobacteria | Coriobacteriales | Coriobacteriaceae | ||
| F524 | 65732a9995f5007582ebb500e7df4ea5 | Firmicutes | Clostridiales | Ruminococcaceae | Oscillospira | |
| F561 | d76796a7df0d1f21a46610474a17f2e4 | Firmicutes | Clostridiales | Ruminococcaceae | Ruminococcus |