Table 2.

Bacterial taxa and ASV significantly different after 3 weeks of CG intake.

Taxa or ASV	Baseline	3 weeks	p-value < 0.5	q-value < 0.1
Family
Weeksellaceae	1.196 ± 0.372	0.667 ± 0.238	.023
Genus
Bergeyella	1.196 ± 0.372	0.665 ± 0.237	.018
Blautia	5.956 ± 0.563	4.957 ± 0.523	.041
Dorea	2.244 ± 0.126	1.677 ± 0.166	.004	0.049
Lachnospiraceae UCG-004	0.087 ± 0.028	0.221 ± 0.06	.025
Roseburia	1.473 ± 0.276	2.301 ± 0.405	.008	0.087
Eubacterium	4.588 ± 0.311	6.665 ± 0.	<.001	0.008
Ruminococcaceae UCG-003	0.218 ± 0.07	0.357 ± 0.085	.029
Ruminococcaceae UCG-005	0.681 ± 0.148	1.31 ± 0.249	.025
Subdoligranulum	1.74 ± 0.226	1.312 ± 0.182	.028
ASV
ASV12_Collinsella sp.	1.501 ± 0.296	1.002 ± 0.209	.036
ASV65_Blautia sp.	0.74 ± 0.091	0.4 ± 0.071	.001
ASV70_Anaerobutyricum [Eubacterium] hallii (99%)	0.358 ± 0.133	0.246 ± 0.098	.036
ASV76_Coprococcus comes (99%)	0.548 ± 0.13	0.297 ± 0.086	.011
ASV81_Subdoligranulum sp.	0.352 ± 0.109	0.131 ± 0.066	.014
ASV107_Eubacterium sp.	0.331 ± 0.118	0.176 ± 0.08	.036
ASV116_Anaerobutyricum [Eubacterium] hallii (99%)	0.346 ± 0.131	0.159 ± 0.092	.036
ASV130_Terrisporobacter sp.	0.171 ± 0.058	0.445 ± 0.113	.037
ASV155_Blautia sp.	0.593 ± 0.069	0.363 ± 0.077	.017
ASV156_Blautia sp.	0.34 ± 0.126	0.204 ± 0.08	.035
ASV173_Unclassified Ruminococcaceae	0.263 ± 0.097	0.131 ± 0.051	.036
ASV241_Roseburia hominis (99%)	0 ± 0	0.274 ± 0.089	.022
ASV730_Actinomyces sp.	0.145 ± 0.039	0.049 ± 0.023	.021

Data are expressed as mean percentage of relative abundance and presented as mean ± SEM. Wilcoxon matched-pairs test, significant if p < 0.05 (FDR correction; q < 0.05). For ASV identification, species name is indicated when the identity is > 98%.