Table 2.
SNP markers associated with test survival (TS) and time of death (TD) traits estimated on pacu against Aeromonas hydrophila infection, using GBLUP and wGBLUP methods
| QTL | GWAS method | AGV (%) | Genes related to the immune system | |
|---|---|---|---|---|
| TS | TD | |||
| 1 | wGBLUP | 2.59 | 2.99 | anp32b, srebf2 |
| 2 | wGBLUP | 4.05 | 1.89 | acbd5, rala, zkscan1 |
| 3 | wGBLUP | 1.17 | 1.31 | lrrc3b, myo16 |
| 4a | wGBLUP | 3.52 | 1.32 | camlg, tcf7, nlrc3 |
| 4b | GBLUP | – | 1.59 | tnfsf13b |
| wGBLUP | 1.65 | 5.34 | ||
| 5a | wGBLUP | 1.19 | 1.40 | axl, emilin1 |
| 5b | GBLUP | – | 1.28 | kalrn, il4i1 |
| wGBLUP | – | 2.98 | ||
| 6 | wGBLUP | – | 3.96 | lgr6 |
| 7a | GBLUP | 1.13 | 1.07 | cyp27c1, fundc1 |
| wGBLUP | – | 1.58 | ||
| 7b | wGBLUP | 3.45 | 3.63 | inhbb, srcin1, tcaf1 |
| 9 | GBLUP | 1.03 | – | tbk1, trim16, zmat3 |
| wGBLUP | 1.67 | 1.62 | ||
| 10a | wGBLUP | 1.56 | 1.57 | mtmr10 |
| 10b | wGBLUP | – | 1.42 | – |
| 11 | GBLUP | 1.10 | 1.05 | rps6ka5, ccr3, cyp2k1 |
| wGBLUP | 1.19 | – | ||
| 12 | wGBLUP | 1.14 | – | – |
| 13a | wGBLUP | 1.18 | 2.74 | itpk1, mark4 |
| 13b | wGBLUP | 1.95 | – | myo18a, caln1 |
| 17 | wGBLUP | 1.08 | 1.34 | tiam1 |
| 18 | GBLUP | – | 1.30 | lyz2, il12rb2 |
| wGBLUP | 1.16 | 15.65 | ||
| 19 | wGBLUP | 1.58 | – | unc5b, znf3 |
| 23 | wGBLUP | 2.06 | – | slk |
| 27 | wGBLUP | 1.22 | – | – |