Table 1.
Primer sequences for the LAMP assays specific for Dracunculus medinensis, D. insignis and the copepod internal positive control.
Primer | Sequence (5′–3′) |
---|---|
D.med F3 | GTTATTACTTCTCATGCTATTATGATA |
D.med B3 | AAACTAAAAATAGCCAAATCAACTCTAT |
D.med FIP | ACAGGCATCAATCAATAACTAACATTATTCTGGTAATGCCTAGTTTGATTGGA |
D.med BIP | AATATTGATTTTGTCTGCTTGTTTGGTGCCAGGATGACCCCTAGTACTT |
D.med F-loop | ATATCAGGAGCCCCCAACATT |
D.med B-loop |
TCTTGTGGAACTAGATGGACTA |
D.insig F3 | TTTTTATGGTTATGCCTAGTTTGATT |
D.insig B3 | CAGAACAATGTAAACTAAAAATAGCCA |
D.insig FIP | CATCAAAGAAACAGGTATTAACCAATAACGGTGGTTTTGGTAATTGGATAGTT |
D.insig BIP | AGTCGATAGTTCTTGTGGTACTAGTTCAACACTATTTCCAGGATGACCA |
D.insig F-loop | CACATTATTCAAACGAGGAAAACTT |
D.insig B-loop |
GAACTGTTTATCCTCCTTTGAGT |
Copepod F3 | GTCGACTGTGGCATAGACG |
Copepod B3 | CTCATTCCGATTACCAGGCC |
Copepod FIP | TCAGGCTCCCTCTCCGGAATCCCACAGTGGTTTTGACGG |
Copepod BIP | AAGGCAGCAGGCACGCAAATTCGGATGAGTCTGGTATCGT |
Copepod F-loop | CGAACCCTAATTCCCCGTTAC |
Copepod B-loop | GCCGAGGTAGTGACGAAAAAT |