TABLE 1.
Sample | Raw reads | Effective rate (%) | Raw base (G) | Clean base (G) | Coverage | Coverage at least 1 or 4 × (%) |
S19 | 83,823,171 | 99.7 | 25.15 | 25.07 | 9.64 | 98.90 or 95.33 |
S9 | 86,473,158 | 99.85 | 25.94 | 25.90 | 9.96 | 99.02 or 94.58 |
S18 | 72,934,572 | 99.72 | 21.88 | 21.82 | 8.39 | 98.69 or 92.56 |
S1 | 75,402,685 | 99.79 | 22.62 | 22.57 | 8.68 | 99.88 or 92.05 |
S13 | 82,954,876 | 99.71 | 24.89 | 24.81 | 9.54 | 98.72 or 94.99 |
S12 | 79,354,645 | 99.57 | 23.81 | 23.70 | 9.12 | 98.71 or 93.83 |
S15 | 76,047,672 | 99.74 | 22.81 | 22.75 | 8.75 | 98.67 or 93.36 |
S14 | 88,777,383 | 99.73 | 26.63 | 26.56 | 10.22 | 98.80 or 96.13 |
S17 | 81,000,552 | 99.71 | 24.30 | 24.23 | 9.32 | 98.74 or 94.64 |
S16 | 82,788,651 | 99.73 | 24.84 | 24.77 | 9.53 | 98.76 or 95.00 |
S10 | 77,587,033 | 99.75 | 23.28 | 23.22 | 8.93 | 99.01 or 93.02 |
S20 | 83,019,325 | 99.71 | 24.91 | 24.83 | 9.55 | 98.68 or 94.91 |
S7 | 71,153,986 | 99.84 | 21.35 | 21.31 | 8.20 | 98.83 or 90.59 |
S5 | 71,392,366 | 99.83 | 21.42 | 21.38 | 8.22 | 98.78 or 90.32 |
S11 | 75,019,716 | 99.72 | 22.50 | 22.43 | 8.63 | 98.62 or 92.79 |
S8 | 74,686,600 | 99.84 | 22.40 | 22.37 | 8.60 | 98.85 or 91.78 |
S6 | 75,178,013 | 99.81 | 22.55 | 22.51 | 8.66 | 98.95 or 92.17 |
S4 | 75,380,120 | 99.83 | 22.61 | 22.57 | 8.68 | 98.94 or 92.05 |
S2 | 75,927,310 | 99.82 | 22.78 | 22.73 | 8.74 | 98.90 or 92.16 |
S3 | 74,458,919 | 99.83 | 22.34 | 22.30 | 8.58 | 98.91 or 91.96 |