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. 2020 Oct 1;3:547. doi: 10.1038/s42003-020-01266-9

Fig. 1. Design of the DegP-activating compounds mimicking Lpp+Leu.

Fig. 1

a Crystal structure of the Lpp trimer (PDB code, 1EQ7; cartoon presentation) with a close-up view of the C-terminal region. All Tyr56 (cyan sticks) and Arg57 (magenta sticks) residues roughly sit in the same plane. Distances from the center to the Tyr56-Cα and Arg57-Cα are 5.0 Å and 7.3 Å, respectively. b Synthesis of the tripodal peptidyl compounds, TMB_(Cys_peptide). Peptides are attached to the benzyl positions of 1,3,5-trimethylbenzene (TMB) via the N-terminal cysteine. Distance from the center to the cysteine-Cα in the extended tripodal compound is about 6.7 Å.