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. 2020 May 11;37(10):3023–3046. doi: 10.1093/molbev/msaa115

Fig. 3.

Fig. 3.

Powers of the T statistic and other sweep detection methods—H12, nSL, SweepFinder2, and Trendsetter—at the 1% FPR to detect soft selective sweeps from selection on standing variation on ν = 4 distinct sweeping haplotypes beginning at times t{200,500,1,000,1,500,2,000,2,500,3,000,3,500,4,000} generations prior to sampling, for the European CEU (top) and sub-Saharan African YRI (bottom) human demographic models inferred with smc++. Analysis data consisted of phased haplotypes of length 1 Mb, with 1,000 replicates for each distinct scenario. Selective sweeps were simulated for five ranges of selection coefficients (s) spanning very weak to very strong, with s for each replicate drawn uniformly at random (from a log scale for s drawn across orders of magnitude). All inferences used a spectrum of K =10 for likelihood computations.