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. 2020 Oct 1;10:16249. doi: 10.1038/s41598-020-73289-5

Table 4.

Repeat type and proportion of SSRs.

Searching item Number of repeat types Major repeat type Percentage
Dinucleotide 4 AG/CT (3788, 34.38%), AT/AT (774, 7.02%), AC/GT (570, 5.17%), CG/CG (25, 0.23%) 3.08
Trinucleotide 10 AAG/CTT (1138, 10.33%), AGC/CTG (1078, 9.78%), AGG/CCT (735, 6.67%), ACC/GGT (616, 5.59%), AAT/ATT (528, 4.79%) 7.69
Tetranucleotide 23 AAAG/CTTT (72, 0.65%), AGGG/CCCT (66, 0.60%), AAAT/ATTT (58, 0.53%), AAGG/CCTT (25, 0.23%), ACAT/ATGT (16, 0.15%) 17.69
Pentanucleotide 19 AAAAG/CTTTT (22, 0.20%), AGAGG/CCTCT (17, 0.15%), AAGAG/CTCTT (10, 0.09%), AAAAT/ATTTT (7, 0.06%), AGGGG/CCCCT (6, 0.05%) 14.62
Hexanucleotide 74 AACAGC/CTGTTG (12, 0.11%), AAATAC/ATTTGT (8, 0.07%), ACCGCC/CGGTGG (7, 0.06%), AAAAAT/ATTTTT (6, 0.05%), ACCATC/ATGGTG (6, 0.05%) 56.92