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. 2020 Sep 28;26:e923567-1–e923567-10. doi: 10.12659/MSM.923567

Table 4.

Sequencing of the 3 genes in the 2 groups.

SNP COMT APOE BDNF
rs4680 rs165599 rs737865 rs429358 rs7412 rs6265
CHR 22 22 22 19 19 11
Allele position 19951271 19956781 19930121 45411941 45412079 27679916
Ref allele G G A T C C
Alt allele A A G C T T
MAF 0.256 0.479 0.315 0.080 0.088 0.492
P for HWE 0.480 0.183 0.469 0.586 0.472 0.977
P* 0.586 0.091 0.264 0.492 0.860 0.663

SNP – single-nucleotide polymorphism; CHR – chromosome; Ref allele – alleles in the loci on the reference sequence; Alt allele – the other (alternative) allele on the locus of the Ref allele; MAF – minor allele frequency (data from 1000 Genomes); HWE – Hardy-Weinberg equilibrium; P for HWE – p-value for HWE in 2 groups; P*p-value for allele frequency differences between the 2 groups.