Table 2.
Ligand-protease ΔGbinding in kcal/mol.
| Cadambine | Proanthocyanidin B2 | Speciophylline | |
|---|---|---|---|
| Monomer B | −51.92 ± 6.03 | −21.20 ± 6.22 | −33.49 ± 4.88 |
| Monomer A | −32.25 ± 5.84 | −15.25 ± 7.31 | −33.34 ± 6.15 |
The average obtained from 250 frames for each MD trajectory (one per nanosecond) using the MM-GBSA method in AmberTools18. The following parameters were used: igb = 2, saltcon = 0.100.