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. 2020 Sep 11;10:1549. doi: 10.3389/fonc.2020.01549

Table 1.

Details of three previous GBM transcriptomic studies from the GEO repository and TCGA.

Dataset ID GBM Normal Experiment type Contributors Download
GSE4290 77 23 Expression profiling by array Sun et al. (22) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE4nnn/GSE4290/matrix/GSE4290_series_matrix.txt.gz
GSE16011 159 8 Expression profiling by array Gravendeel et al. (23) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE16nnn/GSE16011/matrix/GSE16011_series_matrix.txt.gz
GDC TCGA Glioblastoma (GBM) 155 5 Expression profiling by RNA-seq Genomic data commons https://xenabrowser.net/datapages/?dataset=TCGA-GBM.htseq_fpkm.tsv&host=https%3A%2F%2Fgdc.xenahubs.net&removeHub=https%3A%2F%2Fxena.treehouse.gi.ucsc.edu%3A443