Table 3.
CpG | Positiona | Gene | Feature category | -Value | Median % methylationb | Mean difference in % methylation (95% CI)c |
---|---|---|---|---|---|---|
cg25961099 | 2322050 | C11orf21; TSPAN32 | Body; TSS1500 | 0.019 | 9.02 | 0.08 (, 0.26) |
cg01211906 | 2322286 | C11orf21; TSPAN32 | Body; TSS1500 | 0.002 | 2.91 | 0.10 (0.02, 0.18) |
cg09114153 | 2322329 | C11orf21; TSPAN32 | Body; TSS1500 | 0.009 | 9.09 | 0.40 (0.15, 0.64) |
cg01612681 | 2322386 | C11orf21; TSPAN32 | Body; TSS1500 | 1.12 | 0.17 (0.06, 0.29) | |
cg13592872 | 2322500 | C11orf21; TSPAN32 | Body; TSS1500 | 0.502 | 4.20 | 0.28 (0.12, 0.45) |
cg21027517 | 2322507 | C11orf21; TSPAN32 | Body; TSS1500 | 0.150 | 3.80 | 0.27 (0.08, 0.46) |
cg05509777 | 2322517 | C11orf21; TSPAN32 | Body; TSS1500 | 0.096 | 3.75 | 0.37 (0.14, 0.60) |
cg10782575 | 2322543 | C11orf21; TSPAN32 | Body; TSS1500 | 0.001 | 10.77 | 0.49 (0.18, 0.81) |
cg00502099 | 2322618 | C11orf21; TSPAN32 | Body; TSS1500 | 0.092 | 1.18 | 0.09 (, 0.20) |
cg03494648 | 2322642 | C11orf21; TSPAN32 | Body; TSS1500 | 1.06 | 0.02 (, 0.05) | |
cg15924868 | 2322674 | C11orf21; TSPAN32 | Body; TSS1500 | 0.024 | 0.57 | 0.03 (0.00, 0.05) |
cg02537342 | 2322729 | C11orf21; TSPAN32 | Body; TSS1500 | 0.001 | 6.96 | 0.04 (, 0.22) |
cg00041575 | 2322741 | C11orf21; TSPAN32 | Body; TSS1500 | 1.61 | 0.06 (, 0.15) | |
cg05403469 | 2322781 | C11orf21; TSPAN32 | Body; TSS1500 | 0.048 | 1.34 | (, 0.12) |
cg19766471 | 2322802 | C11orf21; TSPAN32 | Body; TSS1500 | 0.005 | 11.75 | 0.72 (0.29, 1.16) |
cg22210337 | 2322808 | C11orf21; TSPAN32 | Body; TSS1500 | 0.002 | 11.46 | 1.05 (0.40, 1.70) |
cg21201830 | 2323056 | C11orf21; TSPAN32 | Body, 1stExon; TSS200 | 0.003 | 1.80 | 0.13 (0.01, 0.25) |
cg15579389 | 2323059 | C11orf21; TSPAN32 | Body, 1stExon; TSS200 | 0.003 | 0.89 | 0.04 (, 0.09) |
cg09358071 | 2323083 | C11orf21; TSPAN32 | Body, 1stExon; TSS200 | 0.92 | 0.04 (0.01, 0.07) | |
cg05572370 | 2323247 | C11orf21; TSPAN32 | TSS200, 1stExon; 5′UTR | 0.337 | 2.22 | 0.08 (, 0.17) |
Note: BMI, body mass index; CI, confidence interval; GED, General Education Diploma: .
GRCh37/hg19 assembly.
Percent methylation calculated .
Effect size estimate from limma models of Beta-values [i.e., mean difference in percent methylation for each unit change in ln(total urinary arsenic levels)] adjusted for age, sex, BMI, self-reported smoking status, education (, high school graduate or GED, ), study center (Arizona, Oklahoma, North and South Dakota), estimated glomerular filtration rate, and cell type proportion estimates.