Table 1.
Gene name | Primer (5′–3′) | Accession no. | Annealing temperature (°C) |
---|---|---|---|
qRT–PCR | |||
GAPDH | F: ctc att tcc tgg tat gac aac ga | NM_001289746.1 | 60 |
R: ctt cct ctt gtg ctc ttg ct | |||
OCT4 | F: ctg ggt tga tcc tcg gac ct | NM_002701.4 | 60 |
R: cac aga act cat acg gcg gg | |||
NANOG | F: aaa gaa tct tca cct atg cc | NM_024865.2 | 60 |
R: gaa gga aga gga gag aca gt | |||
SOX2 | F: ggg aaa tgg aag ggg tgc aaa aga gg | NM_003106.3 | 60 |
R: ttg cgt gag tgt gga tgg gat tgg tg | |||
KLF4 | F: att acc aag agc tca tgc ca | NM_004235.4 | 60 |
R:cct tga gat ggg aac tct ttg | |||
REX1 | F: ttt acg ttt ggg agg agg | NM_174900.3 | 60 |
R: gtg gtc agc tat tca gga g | |||
DPPA3 | F: aaa gct tcc gat aga ggg ga | NM_199286.3 | 60 |
R: tgc tca ccg aag aaa att cc | |||
TBX3 | F: ttt gaa gac cat gga gcc cg | NM_005996.3 | 60 |
R: aca ttc gcc ttc ccg act tg | |||
KLF2 | F: ggc aag acc tac acc aag ag | NM_016270 | 60 |
R: cac aga tgg cac tgg aat gg | |||
KLF5 | F: cct ggt cca gac aag atg tga | NM_001730 | 60 |
R: gaa ctg gtc tac gac tga ggc | |||
DPPA5 | F: gtc gtg gtt tac ggc tcc tat | NM_001025290 | 60 |
R: ggc aag ttt gag cat ccc tc | |||
MAEL | F: ttg ctg atg cca tcc ctt act | NM_032858 | 60 |
R: agctgacatatctggaggtgaa | |||
HORMAD1 | F: gcc cag ttg cag agg act c | NM_001199829 | 60 |
R: tct tgt tcc ata agc gca ttc t | |||
TFCP2L1 | F: cag ccc gag cac tac aac c | NM_014553 | 60 |
R: ctc cca gct tcc gat tct cc | |||
SOX1 | F: cac aac tcg gag atc agc aa | NM_005986.2 | 60 |
R: ggt act tgt aat ccg ggt gc | |||
PAX6 | F: gtc cat ctt tgc ttg gga aa | NM_001127612 | 60 |
R: tag cca ggt tgc gaa gaa ct | |||
TUBB3 | F: gta tcc cga ccg cat cat | NM_006086 | 60 |
R: tct cat ccg tgt tct cca | |||
NESTIN | F: tcc agg aac gga aaa tca ag | NM_006617.1 | 60 |
R: gcc tcc tca tcc cct act tc | |||
GATA4 | F: cct gtc atc tca cta cgg | NM_002052.3 | 60 |
R: gct gtt cca aga gtc ctg | |||
BRA | F: aat tgg tcc agc ctt gga at | NM_003181.2 | 60 |
R: cgt tgc tca cag acc aca | |||
CTNT | F: atg atg cat ttt ggg ggt ta | NM_000364.2 | 60 |
R: cag cac ctt cct cct ctc ag | |||
AFP | F: aaa tgc gtt tct cgt tgc tt | NM_001134.1 | 60 |
R: gcc aca ggc caa tag ttt gt | |||
FOXA2 | F: gga gcg gtg aag atg gaa | NM_021784.4 | 60 |
R: tac gtg ttc atg ccg ttc at | |||
SOX17 | F: ctc tgc ctc ctc cac gaa | NM_022454.3 | 60 |
R: cag aat cca gac ctg cac aa | |||
DNMT3β | F: tcc cag ctc tta cct tac ca | NM_001207056.1 | 60 |
F: aaa ctc ctt ccc atc ctg ata ctc | |||
TET1 | F: cca acc tta ggg agt aac act g | NM_030625.2 | 60 |
R: ggg agt gct gct tct ttc tg | |||
DNMT3L | F: atg aag tca agg cta acc agc | NM_175867 | 60 |
R: cgt cat cgt cgt aca gga aga g | |||
KLF17 | F: gtctttcttccgttctgatgag | NM_173484.3 | 60 |
R: ttcttcattcacctaaggacca | |||
SMAD2 | F: aactatctcctactactctttccc | NM_005901.6 | 60 |
R: cactcctcttcctatatgcct | |||
SMAD3 | F: agacaccagttctacctcct | NM_005902.4 | 60 |
R: ggtctctggaatattgctctg | |||
NODAL | F: gcg tac atg ctg agc ctc ta | NM_018055 | 60 |
R: ggt gac ctg gga caa agt g | |||
NR5A2 | F: ctttgtcccgtgtgtggagat | NM_205860.3 | 60 |
R: gtcggcccttacagcttcta | |||
ARGFX | F: gaacgtacttctttcacccac | NM_001012659 | 60 |
R: ttcctgaaccaaacctttactg | |||
KHDC1L | F: gacttgatgacacgtaccttcg | NM_001126063.3 | 60 |
R: agcgtgacacttggagtcct | |||
LEFTY‐1 | F: tgctacaggtgtcggtgcagagg | NM_020997.4 | 60 |
R: agaaacggacacttgaaggccagg | |||
LEFTY‐2 | F: gggaattgggatacctggat | NM_003240.5 | 60 |
R: ctaaatatgcacgggcaagg | |||
PCR | |||
Mitochondrial cytochrome C oxidase subunit I (COI)_Homo Sapiens | F: tagacatcgtactacacgacacg | ‐ | 58 |
R: tccaggtttatggagggttc |
BRA, brachyury.