Table 2.

Summary results of the cis-eQTL results available from lncRNAKB. Tissues with <80 samples are shown here but, were excluded from the analysis.

Tissue	Number_of_RNA_seq_samples_with_WGS	Number_of_Males	Number_of_Females	Number_of_SNPs_with_MAF_greater_than_0.05	Total_number_of_genes_passed_filter	Total_number_of_PCGs	Total_number_of_lncRNAs	Total_SNP_gene_pairs_eQTLs	Total_SNP_gene_pairs_with_permutation_pvalue_less_than_0.05
Adipose_Tissue	363	220	143	5,952,169	27,029	15,175	11,854	54,871,184	5,766
Adrenal_Gland	146	82	64	5,886,806	25,943	14,973	10,970	51,879,876	4,077
Bladder	9	4	5	5,462,615	28,695	15,597	13,098	*	*
Blood	356	226	130	5,953,536	18,412	11,788	6,624	37,414,178	2,877
Blood_Vessel	378	241	137	5,963,536	25,614	14,770	10,844	51,947,442	5,854
Bone_Marrow	*	*	*	*	22,571	12,612	9,959	*	*
Brain	170	116	54	5,857,467	31,339	16,148	15,191	62,844,553	3,488
Breast	184	102	82	5,901,708	28,839	15,680	13,159	58,130,064	4,267
Cervix_Uteri	8	0	8	5,522,234	28,706	15,649	13,057	*	*
Colon	250	148	102	5,907,992	28,297	15,781	12,516	57,063,773	4,767
Esophagus	353	221	132	5,941,386	26,803	15,439	11,364	54,314,052	4,815
Fallopian_Tube	7	0	7	*	18,492	16,552	1,940	*	*
Heart	251	163	88	5,913,705	24,959	14,788	10,171	50,153,256	4,375
Kidney	29	23	6	5,742,588	28,917	15,726	13,191	*	*
Liver	118	77	41	5,871,833	23,846	14,204	9,642	47,689,780	2,759
Lung	274	182	92	5,926,605	29,045	15,744	13,301	58,884,074	5,461
Muscle	359	220	139	5,962,131	22,042	13,558	8,484	44,548,539	4,454
Nerve	268	174	94	5,941,274	29,326	15,472	13,854	59,363,204	7,416
Ovary	99	0	99	5,873,449	27,292	14,845	12,447	54,588,663	3,466
Pancreas	167	98	69	5,905,087	23,569	14,210	9,359	47,408,959	*
Pituitary	108	76	32	5,814,865	30,586	15,848	14,738	60,707,019	3,949
Prostate	101	0	101	5,810,666	30,373	15,931	14,442	60,377,553	*
Salivary_Gland	63	43	20	5,771,591	28,409	15,679	12,730	*	*
Skin	442	278	164	5,966,760	27,316	15,442	11,874	55,698,051	6,210
Small_Intestine	90	54	36	5,777,092	30,046	15,950	14,096	59,426,622	2,987
Spleen	108	62	46	5,874,443	28,284	14,969	13,315	56,914,604	4,743
Stomach	182	104	78	5,890,077	26,974	15,530	11,444	54,242,450	3,804
Testis	171	0	171	5,875,543	47,909	17,777	30,132	98,376,057	8,951
Thyroid	286	183	103	5,941,584	29,715	15,604	14,111	60,217,108	7,611
Uterus	82	0	82	5,795,583	28,175	15,166	13,009	55,748,102	3,037
Vagina	87	0	87	5,837,620	28,423	15,629	12,794	56,861,978	2,865