TABLE 4.
Genome characteristic of endophytic strain E. roggenkampii ED5.
Characteristics | Value |
Genome size (bp) | 4,702,851 |
GC content (%) | 56.05 |
Topology | Circular |
Chromosome size (bp) | 4,698,609 |
Plasmid size (bp) | 4242 |
Plasmid GC content (%) | 45.66 |
Chromosome | 1 |
Plasmid | 1 |
tRNA | 83 |
rRNA (5S, 16S, 23S) | 9, 8, 8 |
CDS (chromosome, plasmid) | 4,343,6 |
Protein-coding genes (CDS) | 4,349 |
Genomic islands | 7 |
CRISPR | 5 |
Prophage | 2 |
Genes assigned to NR | 4347 |
Genes assigned to Swiss-Prot | 3818 |
Genes assigned to COG | 4028 |
Genes assigned to KEGG | 2839 |
Genes assigned to GO | 2949 |
Genes assigned to Pfam | 3964 |