Table 1. Genetic analysis and parameters for the different core subsets.
A-NE, Average distance between each genotype of the collection and the nearest entry; CV, percentage allelic coverage; E-E, average entry-to-entry distance; E-NE, average distance between each entry and the nearest entry; He, expected heterozygosity; Ho, observed heterozygosity; MR distance, average Modified Rogers genetic distance; Ne, number of effective alleles.
Set Name | Ne | SH | Ho | He | CV | MR Distance | |||
---|---|---|---|---|---|---|---|---|---|
EE | A-NE | E-NE | |||||||
FB_1262 | 1.621 | 0.547 | 0.292 | 0.367 | 0.995 | 0.285 | 0 | 0.131 | |
PwC_69 | 1.675 | 0.574 | 0.202 | 0.39 | 0.987 | 0.318 | 0.203 | 0.237 | |
EE_69 | 1.705 | 0.587 | 0.234 | 0.401 | 0.992 | 0.347 | 0.209 | 0.229 | |
AN_69 | 1.645 | 0.560 | 0.318 | 0.378 | 0.977 | 0.286 | 0.172 | 0.210 | |
EN_69 | 1.704 | 0.587 | 0.269 | 0.402 | 0.991 | 0.334 | 0.207 | 0.275 | |
CV_169 | 1.638 | 0.556 | 0.285 | 0.375 | 0.995 | 0.302 | 0.163 | 0.212 | |
EE_169 | 1.721 | 0.595 | 0.224 | 0.408 | 0.994 | 0.330 | 0.183 | 0.191 | |
AN_169 | 1.643 | 0.559 | 0.300 | 0.377 | 0.987 | 0.290 | 0.137 | 0.203 | |
EN_169 | 1.683 | 0.578 | 0.277 | 0.394 | 0.993 | 0.315 | 0.175 | 0.256 | |
Core_69 | 1.713 | 0.593 | 0.247 | 0.406 | 0.988 | 0.303 | 0.195 | 0.212 | |
Priority_100 | 1.597 | 0.534 | 0.283 | 0.356 | 0.979 | 0.277 | 0.188 | 0.179 | |
PRP_X | 1.647 | 0.563 | 0.270 | 0.379 | 0.988 | 0.290 | 0.165 | 0.180 |