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. 2020 Jul 15;184(2):1004–1023. doi: 10.1104/pp.19.01420

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This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — Phylogeny reconstruction of the LYR-IA orthogroup, containing known legume LCO receptors, based on 122 sequences from 87 species. A gene duplication in the root of the nitrogen-fixing clade is recognized, resulting in two subclades named NFP-I (blue) and NFP-II (green). The symbiotic capacities of the species are marked by filled (positive) and unfilled (negative) symbols: AM symbiosis (blue squares), ectomycorrhizal symbiosis (purple circles), and nodulation (green stars). P. andersoniiPanNFP1 and PanNFP2 are in boldface. Deduced pseudoproteins are depicted in gray/strikethrough. Values indicate IQ-tree UF-bootstrap support%; values >98 are not shown. Branch support for the nitrogen-fixing clade indicates aSH-aLRT/UF-Bootstrap/approximate Mr.Bayes support, respectively. The scale bar represents substitutions per site. A list of species and accession numbers can be found in Supplemental Data Set S2.