Table 2.
Correlations of transcriptomics to in situ properties of the genes where both measurements are available.
In situ | |||
---|---|---|---|
Correlation | H | Z | |
scRNASeq | σ2 | 0.5 | 0.18 |
CV | −0.69 | 0.26 | |
0 | −0.64 | 0.29 | |
Hb | 0.72 | −0.3 |
σ2, variance of a gene across cells; CV, coefficient of variation; 0, number of cells with zero expression; Hb, entropy of binarized expression; H, entropy; Z, join count test statistic.