Table 4.
Number of factors | Model | TA | TBA | CVC | OR (CI 95%) | p-value° |
---|---|---|---|---|---|---|
1 | NAT2-rs1799929* | 0.585 | 0.585 | 10/10 | 1.99 (1.46–2.31) | <0.0001 |
2 | NAT2-rs1801280, NAT2-rs1799929 | 0.614 | 0.6031 | 8/10 | 5.42 (3.26–9.02) | <0.0001 |
3 | NAT2-rs1801280, NAT2-rs1799929, NAT2-rs1208** | 0.644 | 0.637 | 10/10 | 6.59 (4.05, 10.71) | <0.0001 |
4 | NAT2-rs1041983, NAT2-rs1801280, NAT2-rs1799929, NAT2-rs1799931 | 0.662 | 0.5909 | 6/10 | 3.75 (2.71–5.19) | <0.0001 |
5 | NAT2-rs1041983, NAT2-rs1799929, NAT2-rs1799931, NQ01-rs1800566, CYP2E1-rs3813867 | 0.689 | 0.568 | 3/10 | 6.19 (4.18–9.15 | <0.0001 |
6 | NAT2-rs1041983, NAT2-rs1799929, NAT2-rs1208, NAT2-rs1799931, NQ01-rs1800566, CYP2E1-rs3813867 | 0.715 | 0.549 | 5/10 | 5.89 (4.21–8.26) | <0.0001 |
7 | NAT2-rs1041983, NAT2-rs1799929, NAT2-rs1799930, NAT2-rs1208, NAT2-rs1799931, NQ01-rs1800566, CYP2E1-rs3813867 | 0.738 | 0.5751 | 4/10 | 7.33 (5.19–10.35) | <0.0001 |
8 | NAT2-rs1041983, NAT2-rs1801280, NAT2-rs1799929, NAT2-rs1799930, NAT2-rs1208, NAT2-rs1799931, NQ01-rs1800566, CYP2E1-rs3813867 | 0.754 | 0.578 | 10/10 | 8.85 (6.23–12.59) | <0.0001 |
Best one-to-eight-locus model of the NAT2-NQ01-CY2E1 gene–gene interactions with cross-validation consistency (CVC) and prediction error per the n-locus model that have been obtained by the multifactor- dimensionality reduction (MDR) of our data set. TA, training balance accuracy; TBA, testing balance accuracy; *The best one factor model and **The best multilocus model. °P-values from whole statistics data set. Bold values indicate the best single* and models.