Table 3.
Immune cells | Biomarkers | None | Purity | ||
---|---|---|---|---|---|
|
|
||||
Cor | P-value | Cor | P-value | ||
CD8+ T cell | CD8A | 0.514 | *** | 0.479 | *** |
CD8B | 0.292 | *** | 0.259 | *** | |
T cell (general) | CD3D | 0.461 | *** | 0.424 | *** |
CD3E | 0.489 | *** | 0.454 | *** | |
CD2 | 0.488 | *** | 0.455 | *** | |
B cell | CD19 | 0.385 | *** | 0.356 | *** |
CD79A | 0.392 | *** | 0.362 | *** | |
Monocyte | CD86 | 0.437 | *** | 0.416 | *** |
CD115 (CSF1R) | 0.496 | *** | 0.488 | *** | |
TAM | CCL2 | 0.258 | *** | 0.228 | *** |
CD68 | 0.313 | *** | 0.296 | *** | |
IL10 | 0.436 | *** | 0.411 | *** | |
M1 Macrophage | INOS (NOS2) | 0.103 | * | 0.104 | * |
IRF5 | 0.295 | *** | 0.257 | *** | |
COX2 (PTGS2) | 0.06 | 0.224 | 0.044 | 0.392 | |
M2 Macrophage | CD163 | 0.465 | *** | 0.452 | *** |
VSIG4 | 0.386 | *** | 0.376 | *** | |
MS4A4A | 0.476 | *** | 0.452 | *** | |
Neutrophils | CD66b (CEACAM8) | -0.019 | 0.693 | -0.041 | 0.429 |
CD11b (ITGAM) | 0.565 | *** | 0.548 | *** | |
CCR7 | 0.452 | *** | 0.42 | *** | |
Natural killer cell | KIR2DL1 | 0.18 | *** | 0.147 | ** |
KIR2DL3 | 0.165 | *** | 0.129 | * | |
KIR2DL4 | 0.233 | *** | 0.186 | *** | |
KIR3DL1 | 0.22 | *** | 0.202 | ** | |
KIR3DL2 | 0.317 | *** | 0.285 | *** | |
KIR3DL3 | 0.074 | 0.133 | 0.064 | 0.214 | |
KIR2DS4 | 0.133 | ** | 0.094 | 0.0674 | |
Dendritic cell | HLA-DPB1 | 0.477 | *** | 0.454 | *** |
HLA-DQB1 | 0.395 | *** | 0.349 | *** | |
HLA-DRA | 0.48 | *** | 0.45 | *** | |
HLA-DPA1 | 0.49 | *** | 0.463 | *** | |
BDCA-1 (CD1C) | 0.392 | *** | 0.356 | *** | |
BDCA-4 (NRP1) | 0.342 | *** | 0.306 | *** | |
CD11c (ITGAX) | 0.487 | *** | 0.466 | *** | |
Th1 | T-bet (TBX21) | 0.525 | *** | 0.497 | *** |
STAT4 | 0.467 | *** | 0.452 | *** | |
STAT1 | 0.241 | *** | 0.226 | *** | |
IFN-γ (IFNG) | 0.291 | *** | 0.267 | *** | |
TNF-α (TNF) | 0.206 | *** | 0.165 | ** | |
Th2 | GATA3 | 0.357 | *** | 0.321 | *** |
STAT6 | 0.235 | *** | 0.251 | *** | |
STAT5A | - | - | - | - | |
IL13 | 0.131 | ** | 0.138 | *** | |
Tfh | BCL6 | 0.263 | *** | 0.235 | *** |
IL21 | 0.312 | *** | 0.27 | *** | |
Th17 | STAT3 | 0.45 | *** | 0.43 | *** |
IL17A | -0.098 | 0.0469 | -0.106 | 0.04 | |
Treg | FOXP3 | 0.45 | *** | 0.419 | *** |
CCR8 | 0.505 | *** | 0.481 | *** | |
STAT5B | 0.516 | *** | 0.533 | *** | |
TGFb (TGFB1) | 0.367 | *** | 0.357 | *** | |
T cell exhaustion | PD-1 (PDCD1) | 0.482 | *** | 0.448 | *** |
CTLA4 | 0.351 | *** | 0.308 | *** | |
LAG3 | 0.393 | *** | 0.364 | *** | |
TIM-3 (HAVCR2) | 0.49 | *** | 0.467 | *** | |
GZMB | 0.269 | *** | 0.227 | *** |
*P < 0.05, **P < 0.01, ***P < 0.001.