Table 3.

QTL regions associated with the studied traits according to the two employed methods. Effect estimates and MAF are reported

Method	Trait	Region 1 , 1	OCC 2 , 2	Initial position (Mb)	Final position (Mb)	SNPs in the region	Significant SNPs in the region 3	SNP name 4	q‐Value 5	Effect 6	MAF 7
QXPAK	ADGR	11	13	0.40	2.09	90	50	AX‐146990063	0.0056	3.41 (g/day)	0.24
QXPAK	ADGF	2	3	102.22	102.37	11	9	AX‐147016699	0.0350	3.68 (g/day)	0.39
QXPAK	ADGF	3	3	107.99	107.99	1	1	AX‐146983203	0.0350	6.55 (g/day)	0.06
QXPAK	ADGF	4	3	109.07	110.88	111	16	AX‐146982129	0.0211	4.05 (g/day)	0.24
QXPAK	ADGF	5	3	113.46	113.46	1	1	AX‐147140896	0.0410	3.65 (g/day)	0.20
QXPAK	ADGF	6	5	9.07	9.07	1	1	AX‐147010974	0.0416	3.57 (g/day)	0.29
QXPAK	ADGF	7	5	18.95	18.97	2	2	AX‐147049894	0.0416	5.46 (g/day)	0.11
QXPAK	ADGF	8	21	7.17	8.46	67	26	AX‐147102744	0.0135	3.51 (g/day)	0.23
BI	ADGR	9	9	29.66	31.00	66	29	AX‐147167857	0.0039	1.67 (g/day)	0.07
BI	ADGR	10	12	99.88	99.88	0	1	AX‐146984543	0.0222	3.73 (g/day)	0.05
BI	ADGR	12	17	73.57	74.16	29	7	AX‐147012391	0.0183	0.95 (g/day)	0.16
BI	ADGF	1	3	100.99	101.11	3	4	AX‐147009110	0.0399	3.34 (g/day)	0.49
BI	ADGF	2	3	102.22	102.37	10	11	AX‐147016699	0.0302	3.71 (g/day)	0.39
BI	ADGF	4	3	109.07	109.88	58	11	AX‐147097036	0.0313	3.85 (g/day)	0.24
BI	${\overline{\text{FCR}}}_{\mathrm{F}}$	14	6	26.28	26.44	16	10	AX‐147140966	0.0015	0.47 [(g/day)/(g/day)]	0.06
BI	${\overline{\text{FCR}}}_{\mathrm{F}}$	15	16	82.86	83.26	26	7	AX‐147107945	0.0482	0.52 [(g/day/(g/day)]	0.42
BI	${\overline{\text{ADFI}}}_{\mathrm{F}}$	13	5	3.70	3.85	13	12	AX‐147126724	0.0278	0.85 (g/day)	0.37
BI	${\overline{\text{ADRFI}}}_{\mathrm{F}}$	16	21	3.89	4.33	26	8	AX‐147145784	0.0175	1.14 (g/day)	0.25
BI	${\overline{\text{ADRFI}}}_{\mathrm{F}}$	8	21	7.16	7.70	34	15	AX‐147081855	0.0030	2.16 (g/day)	0.37
BI	${\overline{\text{ADRFI}}}_{\mathrm{F}}$	17	21	9.21	9.21	0	1	AX‐147132637	0.0321	1.34 (g/day)	0.35

¹Annotated region, match to Table S2.

² Oryctolagus cuniculus chromosome.

³Chromosome‐wise q‐value <0.05.

⁴Name of the most significant SNP within the region.

⁵Within‐region minimum chromosome‐wide q‐value.

⁶Absolute value of the effect of the most significant SNP.

⁷MAF of most significant SNP.